p-value: | 1e-7 |
log p-value: | -1.790e+01 |
Information Content per bp: | 1.674 |
Number of Target Sequences with motif | 58.0 |
Percentage of Target Sequences with motif | 9.97% |
Number of Background Sequences with motif | 1844.7 |
Percentage of Background Sequences with motif | 4.46% |
Average Position of motif in Targets | 47.7 +/- 24.8bp |
Average Position of motif in Background | 49.7 +/- 35.3bp |
Strand Bias (log2 ratio + to - strand density) | -0.1 |
Multiplicity (# of sites on avg that occur together) | 1.07 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
Match Rank: | 1 |
Score: | 0.73 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CATCATTCAG GYCATCMATCAT |
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Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
Match Rank: | 2 |
Score: | 0.72 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CATCATTCAG TCATCAATCA- |
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PBX1/MA0070.1/Jaspar
Match Rank: | 3 |
Score: | 0.72 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CATCATTCAG- CCATCAATCAAA |
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PB0176.1_Sox5_2/Jaspar
Match Rank: | 4 |
Score: | 0.67 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CATCATTCAG-- TATCATAATTAAGGA |
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PH0134.1_Pbx1/Jaspar
Match Rank: | 5 |
Score: | 0.67 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CATCATTCAG-- TCACCCATCAATAAACA |
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Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
Match Rank: | 6 |
Score: | 0.67 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CATCATTCAG RGCCATYAATCA- |
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Hoxa9/MA0594.1/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CATCATTCAG GCCATAAATCA- |
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PB0144.1_Lef1_2/Jaspar
Match Rank: | 8 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CATCATTCAG--- GAAGATCAATCACTTA |
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PB0188.1_Tcf7l2_2/Jaspar
Match Rank: | 9 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CATCATTCAG--- GAAGATCAATCACTAA |
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PB0028.1_Hbp1_1/Jaspar
Match Rank: | 10 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CATCATTCAG--- NNCATTCATTCATNNN |
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