Information for 13-GTTGGTTCTTGTT (Motif 30)

C T A G A C G T A C G T A C T G A C T G A C G T C G A T A G T C A G C T A C G T A T C G A G C T A G C T
Reverse Opposite:
C T G A C T G A A T G C C G T A T C G A T C A G C G T A C G T A A G T C G T A C T C G A G T C A A G T C
p-value:1e-8
log p-value:-2.066e+01
Information Content per bp:1.743
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif21.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets50.5 +/- 25.0bp
Average Position of motif in Background61.7 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL007.1_BREd/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTTGGTTCTTGTT
GTTTGTT------
 C T A G A C G T A C G T A C T G A C T G A C G T C G A T A G T C A G C T A C G T A T C G A G C T A G C T
C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTTGGTTCTTGTT--
NNNTGTTGTTGTTNG
 C T A G A C G T A C G T A C T G A C T G A C G T C G A T A G T C A G C T A C G T A T C G A G C T A G C T A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTTGGTTCTTGTT
TGTCGGTT------
 A C G T C T A G A C G T A C G T A C T G A C T G A C G T C G A T A G T C A G C T A C G T A T C G A G C T A G C T
C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTTGGTTCTTGTT
NCNTTTGTTATTTNN
 A C G T A C G T C T A G A C G T A C G T A C T G A C T G A C G T C G A T A G T C A G C T A C G T A T C G A G C T A G C T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GTTGGTTCTTGTT
GAATGTTTGTTT-----
 A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C T G A C T G A C G T C G A T A G T C A G C T A C G T A T C G A G C T A G C T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGGTTCTTGTT
TNNTCCTTTGTTCTNNT-
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C T G A C T G A C G T C G A T A G T C A G C T A C G T A T C G A G C T A G C T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GTTGGTTCTTGTT
---ATTTCCTGTN
 C T A G A C G T A C G T A C T G A C T G A C G T C G A T A G T C A G C T A C G T A T C G A G C T A G C T
A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGGTTCTTGTT
NNNTCCTTTGTTCTNNN-
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C T G A C T G A C G T C G A T A G T C A G C T A C G T A T C G A G C T A G C T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GTTGGTTCTTGTT
--CTGTTCCTGG-
 C T A G A C G T A C G T A C T G A C T G A C G T C G A T A G T C A G C T A C G T A T C G A G C T A G C T
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GTTGGTTCTTGTT---
-NTGGTTTCGGTTNNN
 C T A G A C G T A C G T A C T G A C T G A C G T C G A T A G T C A G C T A C G T A T C G A G C T A G C T A C G T A C G T A C G T
A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T