Information for 3-ATTTRGWWRSKRAMAT (Motif 6)

G T C A A C G T A C G T A C G T C T A G A C T G C G T A C G A T C T A G A T G C A C G T C T G A C G T A G T A C C G T A C G A T
Reverse Opposite:
C G T A A C G T A C T G A C G T A G C T G T C A A T C G A G T C G C T A C G A T A G T C G A T C C G T A G T C A C G T A A C G T
p-value:1e-11
log p-value:-2.719e+01
Information Content per bp:1.799
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.4 +/- 23.8bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou2f3/MA0627.1/Jaspar

Match Rank:1
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----ATTTRGWWRSKRAMAT
TNTAATTTGCATACNA----
 A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C G T C T A G A C T G C G T A C G A T C T A G A T G C A C G T C T G A C G T A G T A C C G T A C G A T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:2
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----ATTTRGWWRSKRAMAT
TNTAATTTGCATACNA----
 A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C G T C T A G A C T G C G T A C G A T C T A G A T G C A C G T C T G A C G T A G T A C C G T A C G A T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:3
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----ATTTRGWWRSKRAMAT
TNTAATTTGCATANNN----
 A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C G T C T A G A C T G C G T A C G A T C T A G A T G C A C G T C T G A C G T A G T A C C G T A C G A T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:4
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:ATTTRGWWRSKRAMAT
ATTTGCATA-------
 G T C A A C G T A C G T A C G T C T A G A C T G C G T A C G A T C T A G A T G C A C G T C T G A C G T A G T A C C G T A C G A T
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:5
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:ATTTRGWWRSKRAMAT
-TTTTGGCGGGAAAA-
 G T C A A C G T A C G T A C G T C T A G A C T G C G T A C G A T C T A G A T G C A C G T C T G A C G T A G T A C C G T A C G A T
A C G T C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.49
Offset:0
Orientation:forward strand
Alignment:ATTTRGWWRSKRAMAT
ATTTGCATAACAATG-
 G T C A A C G T A C G T A C G T C T A G A C T G C G T A C G A T C T A G A T G C A C G T C T G A C G T A G T A C C G T A C G A T
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:ATTTRGWWRSKRAMAT
ATTTGCATAT------
 G T C A A C G T A C G T A C G T C T A G A C T G C G T A C G A T C T A G A T G C A C G T C T G A C G T A G T A C C G T A C G A T
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---ATTTRGWWRSKRAMAT
TTCATTTGCATAT------
 A C G T A C G T A C G T G T C A A C G T A C G T A C G T C T A G A C T G C G T A C G A T C T A G A T G C A C G T C T G A C G T A G T A C C G T A C G A T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--ATTTRGWWRSKRAMAT
CTACTTGGATACGGAAT-
 A C G T A C G T G T C A A C G T A C G T A C G T C T A G A C T G C G T A C G A T C T A G A T G C A C G T C T G A C G T A G T A C C G T A C G A T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---ATTTRGWWRSKRAMAT
CTCATTTGCATW-------
 A C G T A C G T A C G T G T C A A C G T A C G T A C G T C T A G A C T G C G T A C G A T C T A G A T G C A C G T C T G A C G T A G T A C C G T A C G A T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T