Information for 14-CGATGCCTGGCGC (Motif 27)

A G T C A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A G T C A G T C C G T A A C T G A C T G A G T C C G T A A C G T A G T C A C T G
p-value:1e-5
log p-value:-1.316e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 36.1bp
Average Position of motif in Background61.8 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CGATGCCTGGCGC-
---TGCCTGAGGCN
 A G T C A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C T G A G T C A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CGATGCCTGGCGC-
---NGCCTGAGGCN
 A G T C A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C T G A G T C A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CGATGCCTGGCGC-
---NGCCTNAGGCN
 A G T C A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C T G A G T C A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGATGCCTGGCGC
--AGGCCTNG---
 A G T C A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C T G A G T C
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGATGCCTGGCGC------
--NNNNTTGGCGCCGANNN
 A G T C A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CGATGCCTGGCGC--
---TGTCTGDCACCT
 A G T C A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGATGCCTGGCGC---
--NNGCNCTGCGCGGC
 A G T C A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGATGCCTGGCGC---
-ATTGCCTGAGGCAAT
 A G T C A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T
A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGATGCCTGGCGC--
--CTGTCTGTCACCT
 A G T C A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T
A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CGATGCCTGGCGC
GGGGCCGAGGCCTG----
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C G T A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C T G A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T