Information for 11-CGGAGGAACACGT (Motif 23)

A T G C A C T G A C T G C G T A A C T G A C T G G T C A G T C A A G T C C G T A A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A C G T A C T G A C G T A C G T A G T C A G T C A C G T A G T C A G T C A T C G
p-value:1e-7
log p-value:-1.833e+01
Information Content per bp:1.941
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.5 +/- 26.0bp
Average Position of motif in Background67.6 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK/MA0819.1/Jaspar

Match Rank:1
Score:0.63
Offset:6
Orientation:forward strand
Alignment:CGGAGGAACACGT---
------AACACGTGTT
 A T G C A C T G A C T G C G T A A C T G A C T G G T C A G T C A A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

MAX/MA0058.3/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CGGAGGAACACGT---
------ACCACGTGCT
 A T G C A C T G A C T G C G T A A C T G A C T G G T C A G T C A A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T

PB0043.1_Max_1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CGGAGGAACACGT-------
----TGACCACGTGGTCGGG
 A T G C A C T G A C T G C G T A A C T G A C T G G T C A G T C A A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C A T G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T A T G C T C A G C A T G C A T G

Arnt/MA0004.1/Jaspar

Match Rank:4
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:CGGAGGAACACGT-
--------CACGTG
 A T G C A C T G A C T G C G T A A C T G A C T G G T C A G T C A A G T C C G T A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G

Mlxip/MA0622.1/Jaspar

Match Rank:5
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:CGGAGGAACACGT--
-------ACACGTGC
 A T G C A C T G A C T G C G T A A C T G A C T G G T C A G T C A A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CGGAGGAACACGT---
----NNACCACGTGGT
 A T G C A C T G A C T G C G T A A C T G A C T G G T C A G T C A A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T

MNT/MA0825.1/Jaspar

Match Rank:7
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CGGAGGAACACGT---
------ACCACGTGCC
 A T G C A C T G A C T G C G T A A C T G A C T G G T C A G T C A A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CGGAGGAACACGT--
-------GCACGTNC
 A T G C A C T G A C T G C G T A A C T G A C T G G T C A G T C A A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

Npas2/MA0626.1/Jaspar

Match Rank:9
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CGGAGGAACACGT---
------NACACGTGCN
 A T G C A C T G A C T G C G T A A C T G A C T G G T C A G T C A A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CGGAGGAACACGT-
------NVCACGTG
 A T G C A C T G A C T G C G T A A C T G A C T G G T C A G T C A A G T C C G T A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G