Information for 7-AGCAAGGGCC (Motif 19)

C G T A A C T G A T G C G T C A G T C A A C T G C T A G A T C G G A T C T A G C
Reverse Opposite:
A T C G C T A G A T G C G A T C G T A C A C G T A C G T A T C G G T A C A C G T
p-value:1e-8
log p-value:-1.997e+01
Information Content per bp:1.810
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.95%
Number of Background Sequences with motif394.5
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets46.3 +/- 24.2bp
Average Position of motif in Background48.4 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGCAAGGGCC--
--CAAGGHCANV
 C G T A A C T G A T G C G T C A G T C A A C T G C T A G A T C G G A T C T A G C A C G T A C G T
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGCAAGGGCC--
GGAGAAAGGTGCGA
 A C G T A C G T C G T A A C T G A T G C G T C A G T C A A C T G C T A G A T C G G A T C T A G C A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGCAAGGGCC
AGAGGAAGTG--
 A C G T A C G T C G T A A C T G A T G C G T C A G T C A A C T G C T A G A T C G G A T C T A G C
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGCAAGGGCC
ACAGGAAGTG--
 A C G T A C G T C G T A A C T G A T G C G T C A G T C A A C T G C T A G A T C G G A T C T A G C
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGCAAGGGCC
CACAGCAGGGGG-
 A C G T A C G T A C G T C G T A A C T G A T G C G T C A G T C A A C T G C T A G A T C G G A T C T A G C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

HES7/MA0822.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCAAGGGCC-
TGGCACGTGCCA
 A C G T C G T A A C T G A T G C G T C A G T C A A C T G C T A G A T C G G A T C T A G C A C G T
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGCAAGGGCC-
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T A C G T C G T A A C T G A T G C G T C A G T C A A C T G C T A G A T C G G A T C T A G C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGCAAGGGCC-
SDGCAGGTGCNS
 A C G T C G T A A C T G A T G C G T C A G T C A A C T G C T A G A T C G G A T C T A G C A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AGCAAGGGCC
CCGCATAGCAACGGA-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A T G C G T C A G T C A A C T G C T A G A T C G G A T C T A G C
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGCAAGGGCC
GAACAATGGN-
 A C G T C G T A A C T G A T G C G T C A G T C A A C T G C T A G A T C G G A T C T A G C
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T