Information for 1-AATAGCATAC (Motif 6)

C G T A C G T A A G C T C G T A A C T G T G A C T G C A A G C T G T C A T A G C
Reverse Opposite:
A T C G C A G T T C G A A C G T A C T G T G A C A C G T T C G A G C A T A C G T
p-value:1e-7
log p-value:-1.790e+01
Information Content per bp:1.711
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif10.10%
Number of Background Sequences with motif422.3
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets48.6 +/- 27.4bp
Average Position of motif in Background50.2 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F4/MA0789.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:AATAGCATAC
ATTTGCATA-
 C G T A C G T A A G C T C G T A A C T G T G A C T G C A A G C T G T C A T A G C
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AATAGCATAC
TAATTTGCATAA
 A C G T A C G T C G T A C G T A A G C T C G T A A C T G T G A C T G C A A G C T G T C A T A G C
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

Pou2f3/MA0627.1/Jaspar

Match Rank:3
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----AATAGCATAC--
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T C G T A C G T A A G C T C G T A A C T G T G A C T G C A A G C T G T C A T A G C A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:4
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----AATAGCATAC--
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T C G T A C G T A A G C T C G T A A C T G T G A C T G C A A G C T G T C A T A G C A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

POU3F3/MA0788.1/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AATAGCATAC-
AAATTAGCATAAT
 A C G T A C G T C G T A C G T A A G C T C G T A A C T G T G A C T G C A A G C T G T C A T A G C A C G T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AATAGCATAC
ATTTGCATA-
 C G T A C G T A A G C T C G T A A C T G T G A C T G C A A G C T G T C A T A G C
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----AATAGCATAC--
TNTAATTTGCATANNN
 A C G T A C G T A C G T A C G T C G T A C G T A A G C T C G T A A C T G T G A C T G C A A G C T G T C A T A G C A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

POU3F1/MA0786.1/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AATAGCATAC
TAATTTGCATAA
 A C G T A C G T C G T A C G T A A G C T C G T A A C T G T G A C T G C A A G C T G T C A T A G C
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---AATAGCATAC
BTVATTWGCATA-
 A C G T A C G T A C G T C G T A C G T A A G C T C G T A A C T G T G A C T G C A A G C T G T C A T A G C
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AATAGCATAC-
AATTTGCATANT
 A C G T C G T A C G T A A G C T C G T A A C T G T G A C T G C A A G C T G T C A T A G C A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T