Information for 2-TATACCATTTAGA (Motif 5)

A C G T C G T A A G C T C G T A A G T C A T G C C G T A A C G T A C G T A C G T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T C G T A C G T A C G T A A C G T A T C G T C A G A C G T C T G A A C G T C G T A
p-value:1e-8
log p-value:-2.045e+01
Information Content per bp:1.948
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.3 +/- 4.6bp
Average Position of motif in Background48.2 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TATACCATTTAGA
---ANCGTTTANN
 A C G T C G T A A G C T C G T A A G T C A T G C C G T A A C G T A C G T A C G T C G T A A C T G C G T A
A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

Barhl1/MA0877.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TATACCATTTAGA
---NNCAATTANN
 A C G T C G T A A G C T C G T A A G T C A T G C C G T A A C G T A C G T A C G T C G T A A C T G C G T A
A C G T A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

PH0092.1_Lhx2/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TATACCATTTAGA----
TAAACTAATTAGTGAAC
 A C G T C G T A A G C T C G T A A G T C A T G C C G T A A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
C G A T T G C A G T C A T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A T G G T C A G T C A A T G C

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TATACCATTTAGA
---ACCACTTAA-
 A C G T C G T A A G C T C G T A A G T C A T G C C G T A A C G T A C G T A C G T C G T A A C T G C G T A
A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T

PH0107.1_Msx2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TATACCATTTAGA---
GAAGACCAATTAGCGCT
 A C G T A C G T C G T A A G C T C G T A A G T C A T G C C G T A A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

Nobox/MA0125.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TATACCATTTAGA
---ACCAATTA--
 A C G T C G T A A G C T C G T A A G T C A T G C C G T A A C G T A C G T A C G T C G T A A C T G C G T A
A C G T A C G T A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TATACCATTTAGA
AATATGCAAATTAG-
 A C G T A C G T A C G T C G T A A G C T C G T A A G T C A T G C C G T A A C G T A C G T A C G T C G T A A C T G C G T A
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TATACCATTTAGA---
----CCTTTTATAGNC
 A C G T C G T A A G C T C G T A A G T C A T G C C G T A A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

VENTX/MA0724.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TATACCATTTAGA
---ACCGATTAG-
 A C G T C G T A A G C T C G T A A G T C A T G C C G T A A C G T A C G T A C G T C G T A A C T G C G T A
A C G T A C G T A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TATACCATTTAGA
---ACCACTTAA-
 A C G T C G T A A G C T C G T A A G T C A T G C C G T A A C G T A C G T A C G T C G T A A C T G C G T A
A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T