Information for 1-TTGATTAATS (Motif 6)

A G C T C G A T C T A G G T C A C G A T A C G T C G T A T C G A A C G T T A G C
Reverse Opposite:
A T C G G T C A A G C T A C G T C G T A G C T A A C G T G A T C G C T A C T G A
p-value:1e-7
log p-value:-1.686e+01
Information Content per bp:1.747
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif8.59%
Number of Background Sequences with motif95.7
Percentage of Background Sequences with motif0.95%
Average Position of motif in Targets37.4 +/- 27.9bp
Average Position of motif in Background47.7 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:TTGATTAATS-
NTAATTAATAT
 A G C T C G A T C T A G G T C A C G A T A C G T C G T A T C G A A C G T T A G C A C G T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

PH0173.1_Uncx/Jaspar

Match Rank:2
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----TTGATTAATS---
CNCNTTAATTAATTANN
 A C G T A C G T A C G T A C G T A G C T C G A T C T A G G T C A C G A T A C G T C G T A T C G A A C G T T A G C A C G T A C G T A C G T
T G A C A T C G A G T C T C A G A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A C G T A G C T C G T A A G C T A C T G

PH0095.1_Lhx5/Jaspar

Match Rank:3
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----TTGATTAATS--
ANNATTTAATTAATTNN
 A C G T A C G T A C G T A C G T A C G T A G C T C G A T C T A G G T C A C G A T A C G T C G T A T C G A A C G T T A G C A C G T A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PH0153.1_Prop1/Jaspar

Match Rank:4
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----TTGATTAATS--
GNNTNTTAATTAATNCN
 A C G T A C G T A C G T A C G T A C G T A G C T C G A T C T A G G T C A C G A T A C G T C G T A T C G A A C G T T A G C A C G T A C G T
C T A G G A C T G C A T G C A T G T A C G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A G C T A C G T A G T C A C T G

PH0093.1_Lhx3/Jaspar

Match Rank:5
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----TTGATTAATS--
NNTATTTAATTAATTNN
 A C G T A C G T A C G T A C G T A C G T A G C T C G A T C T A G G T C A C G A T A C G T C G T A T C G A A C G T T A G C A C G T A C G T
T G C A C A G T C A G T G C T A G C A T G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A A G C T C A G T G C A T A T G C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:TTGATTAATS-
-TGATTGATGA
 A G C T C G A T C T A G G T C A C G A T A C G T C G T A T C G A A C G T T A G C A C G T
A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

PH0136.1_Phox2b/Jaspar

Match Rank:7
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----TTGATTAATS---
CNNNTTAATTAATTNNN
 A C G T A C G T A C G T A C G T A G C T C G A T C T A G G T C A C G A T A C G T C G T A T C G A A C G T T A G C A C G T A C G T A C G T
A T G C T A G C G A C T T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A C G T C A G T T G A C A G T C A T C G

PH0011.1_Alx1_2/Jaspar

Match Rank:8
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----TTGATTAATS---
CGCATTAATTAATTGGC
 A C G T A C G T A C G T A C G T A G C T C G A T C T A G G T C A C G A T A C G T C G T A T C G A A C G T T A G C A C G T A C G T A C G T
A G T C T C A G G T A C C T G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A A G C T A G C T C T A G C T A G T G A C

PH0146.1_Pou3f1/Jaspar

Match Rank:9
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---TTGATTAATS----
NANTTAATTAATTANNN
 A C G T A C G T A C G T A G C T C G A T C T A G G T C A C G A T A C G T C G T A T C G A A C G T T A G C A C G T A C G T A C G T A C G T
C A T G G C T A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T G A C T

PH0128.1_Otp/Jaspar

Match Rank:10
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----TTGATTAATS---
CNNATTAATTAATTNNN
 A C G T A C G T A C G T A C G T A G C T C G A T C T A G G T C A C G A T A C G T C G T A T C G A A C G T T A G C A C G T A C G T A C G T
G T A C G T A C G T C A T C G A G A C T G A C T T C G A C T G A A G C T A C G T C T G A C T G A A G C T C G A T C T G A A G T C A C T G