Information for 5-ATTATTATATCCT (Motif 5)

C G T A C G A T A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C G T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G C G T A C G A T C G T A C G A T C G T A C G T A A C G T C G T A C G T A A C G T
p-value:1e-7
log p-value:-1.793e+01
Information Content per bp:1.941
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets65.8 +/- 21.9bp
Average Position of motif in Background20.0 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ATTATTATATCCT
TATAATTATAATATTC-
 A C G T A C G T A C G T A C G T C G T A C G A T A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C G T A G T C A G T C A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:ATTATTATATCCT-
---AAGATATCCTT
 C G T A C G A T A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ATTATTATATCCT
GCTAATTATAATTATC-
 A C G T A C G T A C G T A C G T C G T A C G A T A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C G T A G T C A G T C A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATTATTATATCCT
TTTAATTATAATTAAG-
 A C G T A C G T A C G T A C G T C G T A C G A T A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C G T A G T C A G T C A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATTATTATATCCT
AATTATT-------
 A C G T C G T A C G A T A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C G T A G T C A G T C A C G T
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATTATTATATCCT
TAAGATTATAATACGG-
 A C G T A C G T A C G T A C G T C G T A C G A T A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C G T A G T C A G T C A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ATTATTATATCCT-----
--GATAACATCCTAGTAG
 C G T A C G A T A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

Mecom/MA0029.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATTATTATATCCT
TNTTATCTTATCTT
 A C G T C G T A C G A T A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C G T A G T C A G T C A C G T
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.59
Offset:6
Orientation:forward strand
Alignment:ATTATTATATCCT---
------ATTTCCTGTN
 C G T A C G A T A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

PH0166.1_Six6_2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATTATTATATCCT---
AATNTTGATACCCTATN
 A C G T C G T A C G A T A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T