Information for 2-GCCCCTTTTCAAA (Motif 2)

A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T C G A T G T A C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C T G C T A G A C T G G T A C
p-value:1e-8
log p-value:-2.069e+01
Information Content per bp:1.936
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 22.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GCCCCTTTTCAAA
---CGGTTTCAAA
 A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T C G A T G T A C C G T A C G T A C G T A
A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

INSM1/MA0155.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCTTTTCAAA
CGCCCCCTGACA--
 A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T C G A T G T A C C G T A C G T A C G T A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GCCCCTTTTCAAA-
-----NATTCAAAT
 A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T C G A T G T A C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

PB0128.1_Gcm1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCCCCTTTTCAAA
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T C G A T G T A C C G T A C G T A C G T A
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

KLF13/MA0657.1/Jaspar

Match Rank:5
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------GCCCCTTTTCAAA
ATGCCACGCCCCTTTTTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T C G A T G T A C C G T A C G T A C G T A
C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCCCCTTTTCAAA
-----TTTTCCA-
 A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T C G A T G T A C C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCCCCTTTTCAAA--
---CCTTTTATAGNC
 A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T C G A T G T A C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCCCCTTTTCAAA-
----ATTTTCCATT
 A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T C G A T G T A C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCTTTTCAAA---
NTNTTCTTATCAGTNTN
 A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T C G A T G T A C C G T A C G T A C G T A A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GCCCCTTTTCAAA
AAGACCCYYN-----
 A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T C G A T G T A C C G T A C G T A C G T A
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T A C G T A C G T