Information for 5-CCCBAGCTCTGACCCA (Motif 9)

A G T C A G T C A G T C A G T C C G T A A T C G A T G C A G C T A G T C A C G T A T C G C G T A A T G C A G T C G T A C C G T A
Reverse Opposite:
C G A T A C T G A C T G A T C G G C A T A T G C C G T A A C T G C T G A A T C G T A G C A C G T T A C G A C T G C T A G A C T G
p-value:1e-9
log p-value:-2.177e+01
Information Content per bp:1.775
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 27.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCCBAGCTCTGACCCA-
--TGACCTCTGACCCCN
 A G T C A G T C A G T C A G T C C G T A A T C G A T G C A G C T A G T C A C G T A T C G C G T A A T G C A G T C G T A C C G T A A C G T
A C G T A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:2
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCCBAGCTCTGACCCA
--TGACCTTTGACCTC
 A G T C A G T C A G T C A G T C C G T A A T C G A T G C A G C T A G T C A C G T A T C G C G T A A T G C A G T C G T A C C G T A
A C G T A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCCBAGCTCTGACCCA
--TGACCTTTGCCCCA
 A G T C A G T C A G T C A G T C C G T A A T C G A T G C A G C T A G T C A C G T A T C G C G T A A T G C A G T C G T A C C G T A
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCCBAGCTCTGACCCA--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A G T C A G T C A G T C A G T C C G T A A T C G A T G C A G C T A G T C A C G T A T C G C G T A A T G C A G T C G T A C C G T A A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:CCCBAGCTCTGACCCA
---------TGACCT-
 A G T C A G T C A G T C A G T C C G T A A T C G A T G C A G C T A G T C A C G T A T C G C G T A A T G C A G T C G T A C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCCBAGCTCTGACCCA-
--TGACCTTTGCCCTAN
 A G T C A G T C A G T C A G T C C G T A A T C G A T G C A G C T A G T C A C G T A T C G C G T A A T G C A G T C G T A C C G T A A C G T
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCCBAGCTCTGACCCA
--CNAGGCCT------
 A G T C A G T C A G T C A G T C C G T A A T C G A T G C A G C T A G T C A C G T A T C G C G T A A T G C A G T C G T A C C G T A
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCCBAGCTCTGACCCA
--TGACCTTTGACCTN
 A G T C A G T C A G T C A G T C C G T A A T C G A T G C A G C T A G T C A C G T A T C G C G T A A T G C A G T C G T A C C G T A
A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCCBAGCTCTGACCCA
--TGACCTTTGACCCC
 A G T C A G T C A G T C A G T C C G T A A T C G A T G C A G C T A G T C A C G T A T C G C G T A A T G C A G T C G T A C C G T A
A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CCCBAGCTCTGACCCA
BTGACCTCTNNHTGACCY-
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G T A A T C G A T G C A G C T A G T C A C G T A T C G C G T A A T G C A G T C G T A C C G T A
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T A C G T