Information for 3-GTGAGGCCACAGS (Motif 7)

A C T G A C G T A C T G C T G A C T A G A C T G A T G C G T A C T G C A G T A C G T C A A C T G A T C G
Reverse Opposite:
T A G C T G A C A C G T C A T G A C G T A C T G T A C G A G T C A G T C A G C T G T A C C G T A A G T C
p-value:1e-9
log p-value:-2.271e+01
Information Content per bp:1.733
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif36.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets53.4 +/- 25.6bp
Average Position of motif in Background46.3 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTGAGGCCACAGS
-TRAGGTCA----
 A C T G A C G T A C T G C T G A C T A G A C T G A T G C G T A C T G C A G T A C G T C A A C T G A T C G
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GTGAGGCCACAGS
--AAGGTCAC---
 A C T G A C G T A C T G C T G A C T A G A C T G A T G C G T A C T G C A G T A C G T C A A C T G A T C G
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTGAGGCCACAGS---
--CAGGCCNNGGCCNN
 A C T G A C G T A C T G C T G A C T A G A C T G A T G C G T A C T G C A G T A C G T C A A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTGAGGCCACAGS
CGGTGACGTCAC---
 A C G T A C G T A C T G A C G T A C T G C T G A C T A G A C T G A T G C G T A C T G C A G T A C G T C A A C T G A T C G
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTGAGGCCACAGS
-TGACGTCA----
 A C T G A C G T A C T G C T G A C T A G A C T G A T G C G T A C T G C A G T A C G T C A A C T G A T C G
A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTGAGGCCACAGS
-AGRGGTCA----
 A C T G A C G T A C T G C T G A C T A G A C T G A T G C G T A C T G C A G T A C G T C A A C T G A T C G
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTGAGGCCACAGS
-CTAGGCCT----
 A C T G A C G T A C T G C T G A C T A G A C T G A T G C G T A C T G C A G T A C G T C A A C T G A T C G
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTGAGGCCACAGS-
---AAACCACAGAN
 A C T G A C G T A C T G C T G A C T A G A C T G A T G C G T A C T G C A G T A C G T C A A C T G A T C G A C G T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTGAGGCCACAGS
RTGACGTCAYCN-
 A C T G A C G T A C T G C T G A C T A G A C T G A T G C G T A C T G C A G T A C G T C A A C T G A T C G
T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTGAGGCCACAGS
---AGGTCA----
 A C T G A C G T A C T G C T G A C T A G A C T G A T G C G T A C T G C A G T A C G T C A A C T G A T C G
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T