Information for 4-GACTGGGAGGGAATTT (Motif 5)

A C T G G T C A G T A C A C G T A C T G A C T G C T A G C T G A A C T G C A T G A C T G C T G A C G T A C G A T A G C T A G C T
Reverse Opposite:
C T G A T C G A C G T A C G A T G A C T G T A C G A T C G T A C A G C T A G T C A G T C G T A C G T C A A C T G C A G T G T A C
p-value:1e-12
log p-value:-2.786e+01
Information Content per bp:1.694
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif30.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets43.4 +/- 25.5bp
Average Position of motif in Background49.4 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GACTGGGAGGGAATTT
GTATTGGGTGGGTAATT
 A C G T A C T G G T C A G T A C A C G T A C T G A C T G C T A G C T G A A C T G C A T G A C T G C T G A C G T A C G A T A G C T A G C T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GACTGGGAGGGAATTT
TATTATGGGATGGATAA-
 A C G T A C G T A C T G G T C A G T A C A C G T A C T G A C T G C T A G C T G A A C T G C A T G A C T G C T G A C G T A C G A T A G C T A G C T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GACTGGGAGGGAATTT
--BTKGGCGGGAAA--
 A C T G G T C A G T A C A C G T A C T G A C T G C T A G C T G A A C T G C A T G A C T G C T G A C G T A C G A T A G C T A G C T
A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GACTGGGAGGGAATTT
--GTGGGGGGGG----
 A C T G G T C A G T A C A C G T A C T G A C T G C T A G C T G A A C T G C A T G A C T G C T G A C G T A C G A T A G C T A G C T
A C G T A C G T C T A G C A G T C A T G A C T G T C A G C T A G C T A G C A T G C A T G A C T G A C G T A C G T A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GACTGGGAGGGAATTT
--TTTGGCGGGAAA--
 A C T G G T C A G T A C A C G T A C T G A C T G C T A G C T G A A C T G C A T G A C T G C T G A C G T A C G A T A G C T A G C T
A C G T A C G T C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GACTGGGAGGGAATTT
-TTTTGGCGGGAAAA-
 A C T G G T C A G T A C A C G T A C T G A C T G C T A G C T G A A C T G C A T G A C T G C T G A C G T A C G A T A G C T A G C T
A C G T C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A A C G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GACTGGGAGGGAATTT
----GGGCGGGAAGG-
 A C T G G T C A G T A C A C G T A C T G A C T G C T A G C T G A A C T G C A T G A C T G C T G A C G T A C G A T A G C T A G C T
A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

PB0100.1_Zfp740_1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GACTGGGAGGGAATTT
NANNTGGGGGGGGNGN-
 A C G T A C T G G T C A G T A C A C G T A C T G A C T G C T A G C T G A A C T G C A T G A C T G C T G A C G T A C G A T A G C T A G C T
T A G C C T G A C G T A C A T G C A G T C A T G C A T G C A T G C A T G C A T G C A T G A C T G A C T G C T A G A T C G C T A G A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GACTGGGAGGGAATTT
ATTTTNGGGGGGCNN--
 A C G T A C T G G T C A G T A C A C G T A C T G A C T G C T A G C T G A A C T G C A T G A C T G C T G A C G T A C G A T A G C T A G C T
T C G A C A G T G C A T C G A T C G A T C G A T C A T G C T A G A C T G A C T G A C T G A T C G A G T C G A C T G A C T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GACTGGGAGGGAATTT--
--------GGGAATTTCC
 A C T G G T C A G T A C A C G T A C T G A C T G C T A G C T G A A C T G C A T G A C T G C T G A C G T A C G A T A G C T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C