Information for 3-TABAGCCAAG (Motif 18)

C A G T C T G A A T C G C G T A C T A G A G T C G T A C G T C A C G T A C A T G
Reverse Opposite:
G T A C C G A T C A G T A C T G C T A G A G T C A C G T T A G C A G C T G T C A
p-value:1e-7
log p-value:-1.805e+01
Information Content per bp:1.709
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif9.34%
Number of Background Sequences with motif1823.4
Percentage of Background Sequences with motif3.65%
Average Position of motif in Targets53.3 +/- 27.5bp
Average Position of motif in Background49.7 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TABAGCCAAG
--CAGCC---
 C A G T C T G A A T C G C G T A C T A G A G T C G T A C G T C A C G T A C A T G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TABAGCCAAG
-BCAGACWA-
 C A G T C T G A A T C G C G T A C T A G A G T C G T A C G T C A C G T A C A T G
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TABAGCCAAG
-CGTGCCAAG
 C A G T C T G A A T C G C G T A C T A G A G T C G T A C G T C A C G T A C A T G
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TABAGCCAAG---
--AAGGCAAGTGT
 C A G T C T G A A T C G C G T A C T A G A G T C G T A C G T C A C G T A C A T G A C G T A C G T A C G T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TABAGCCAAG
---TGCCAA-
 C A G T C T G A A T C G C G T A C T A G A G T C G T A C G T C A C G T A C A T G
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TABAGCCAAG
AAAAGTCAA-
 C A G T C T G A A T C G C G T A C T A G A G T C G T A C G T C A C G T A C A T G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TABAGCCAAG---
---TGCCCAGNHW
 C A G T C T G A A T C G C G T A C T A G A G T C G T A C G T C A C G T A C A T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TABAGCCAAG
GRTGMTRGAGCC---
 A C G T A C G T A C G T A C G T A C G T C A G T C T G A A T C G C G T A C T A G A G T C G T A C G T C A C G T A C A T G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TABAGCCAAG---
GATAACATCCTAGTAG
 A C G T A C G T A C G T C A G T C T G A A T C G C G T A C T A G A G T C G T A C G T C A C G T A C A T G A C G T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TABAGCCAAG---
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T C A G T C T G A A T C G C G T A C T A G A G T C G T A C G T C A C G T A C A T G A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T