Information for 7-CTTTACATGTGAG (Motif 14)

A G T C A C G T A G C T A C G T C G T A G T A C C G T A C G A T A C T G A C G T A T C G C G T A A C T G
Reverse Opposite:
A G T C A C G T A T G C C G T A A G T C C G T A A C G T A C T G A C G T C G T A C T G A C G T A A C T G
p-value:1e-8
log p-value:-1.900e+01
Information Content per bp:1.937
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.8 +/- 25.0bp
Average Position of motif in Background62.8 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0085.1_Irx4/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTTTACATGTGAG--
NNTTTTACATGTANNNT
 A C G T A C G T A G T C A C G T A G C T A C G T C G T A G T A C C G T A C G A T A C T G A C G T A T C G C G T A A C T G A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PH0084.1_Irx3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTTTACATGTGAG---
AATATACATGTAATATA
 A C G T A G T C A C G T A G C T A C G T C G T A G T A C C G T A C G A T A C T G A C G T A T C G C G T A A C T G A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTTTACATGTGAG---
AAAATACATGTAATACT
 A C G T A G T C A C G T A G C T A C G T C G T A G T A C C G T A C G A T A C T G A C G T A T C G C G T A A C T G A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0082.1_Irx2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTTTACATGTGAG---
TAAATACATGTAAAATT
 A C G T A G T C A C G T A G C T A C G T C G T A G T A C C G T A C G A T A C T G A C G T A T C G C G T A A C T G A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTTTACATGTGAG--
ANTNNTACATGTANNTN
 A C G T A C G T A G T C A C G T A G C T A C G T C G T A G T A C C G T A C G A T A C T G A C G T A T C G C G T A A C T G A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTTTACATGTGAG--
ANTTNTACATGTANTTN
 A C G T A C G T A G T C A C G T A G C T A C G T C G T A G T A C C G T A C G A T A C T G A C G T A T C G C G T A A C T G A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTTTACATGTGAG
---KCCACGTGAC
 A G T C A C G T A G C T A C G T C G T A G T A C C G T A C G A T A C T G A C G T A T C G C G T A A C T G
A C G T A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CTTTACATGTGAG-
-----CAGGTGAGG
 A G T C A C G T A G C T A C G T C G T A G T A C C G T A C G A T A C T G A C G T A T C G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTTTACATGTGAG
TTCATTTGCATAT---
 A C G T A C G T A C G T A G T C A C G T A G C T A C G T C G T A G T A C C G T A C G A T A C T G A C G T A T C G C G T A A C T G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTTTACATGTGAG
BTVATTWGCATA----
 A C G T A C G T A C G T A G T C A C G T A G C T A C G T C G T A G T A C C G T A C G A T A C T G A C G T A T C G C G T A A C T G
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T