Information for 1-AGTACCTAAT (Motif 12)

C G T A C T A G A C G T C T G A G T A C G T A C A C G T C G T A C G T A C G A T
Reverse Opposite:
C G T A A C G T A C G T C G T A A C T G A C T G A G C T G T C A A G T C A C G T
p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.873
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif65.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets42.4 +/- 21.0bp
Average Position of motif in Background49.5 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----AGTACCTAAT--
TACTAAGTACTTAAATG
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C T G A G T A C G T A C A C G T C G T A C G T A C G A T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

PH0112.1_Nkx2-3/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----AGTACCTAAT-
CTTTAAGTACTTAATG
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C T G A G T A C G T A C A C G T C G T A C G T A C G A T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PH0116.1_Nkx2-9/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AGTACCTAAT--
TTTTAAGTACTTAAATT
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C T G A G T A C G T A C A C G T C G T A C G T A C G A T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

TEF/MA0843.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGTACCTAAT-
TATTACGTAACA
 A C G T C G T A C T A G A C G T C T G A G T A C G T A C A C G T C G T A C G T A C G A T A C G T
A G C T T C G A G C A T C G A T C T G A G A T C C T A G A G C T G C T A C T G A A G T C T G C A

PH0154.1_Prrx1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGTACCTAAT-------
ANNAGTTAATTAGTTAN
 C G T A C T A G A C G T C T G A G T A C G T A C A C G T C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A A T C G G A C T G T C A T C A G A G C T G A C T C T G A C T G A A G C T A C G T C T G A C T A G A G C T C A G T T G C A A T G C

BARX1/MA0875.1/Jaspar

Match Rank:6
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:AGTACCTAAT---
-----NTAATTGN
 C G T A C T A G A C G T C T G A G T A C G T A C A C G T C G T A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

NFIL3/MA0025.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGTACCTAAT
ANGTTACATAA-
 A C G T A C G T C G T A C T A G A C G T C T G A G T A C G T A C A C G T C G T A C G T A C G A T
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AGTACCTAAT----
----NNTAATTANN
 C G T A C T A G A C G T C T G A G T A C G T A C A C G T C G T A C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

DBP/MA0639.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGTACCTAAT-
TATTACGTAACA
 A C G T C G T A C T A G A C G T C T G A G T A C G T A C A C G T C G T A C G T A C G A T A C G T
A C G T T C G A G C A T A C G T C T G A A G T C T C A G A G C T T G C A C G T A A G T C T C G A

PDX1/MA0132.2/Jaspar

Match Rank:10
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:AGTACCTAAT---
-----CTAATTAN
 C G T A C T A G A C G T C T G A G T A C G T A C A C G T C G T A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T G A A T G C