Information for 1-GTTCWGCCTGKGAGTC (Motif 1)

A C T G A C G T A C G T G A T C C G A T A C T G T A G C G T A C A C G T T A C G C A G T C A T G C G T A A C T G A G C T A G T C
Reverse Opposite:
A C T G T C G A T G A C G C A T G T A C G T C A A T G C C G T A C A T G A C T G T G A C C G T A C T A G T G C A C G T A T G A C
p-value:1e-13
log p-value:-3.097e+01
Information Content per bp:1.632
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif3.53%
Number of Background Sequences with motif131.8
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets49.2 +/- 27.2bp
Average Position of motif in Background46.9 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GTTCWGCCTGKGAGTC-
-----GSCTGTCACTCA
 A C T G A C G T A C G T G A T C C G A T A C T G T A G C G T A C A C G T T A C G C A G T C A T G C G T A A C T G A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GTTCWGCCTGKGAGTC
------GCTGTG----
 A C T G A C G T A C G T G A T C C G A T A C T G T A G C G T A C A C G T T A C G C A G T C A T G C G T A A C T G A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GTTCWGCCTGKGAGTC--
------NCTGTCAATCAN
 A C T G A C G T A C G T G A T C C G A T A C T G T A G C G T A C A C G T T A C G C A G T C A T G C G T A A C T G A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GTTCWGCCTGKGAGTC
--ACTTCCTGTT----
 A C T G A C G T A C G T G A T C C G A T A C T G T A G C G T A C A C G T T A C G C A G T C A T G C G T A A C T G A G C T A G T C
A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GTTCWGCCTGKGAGTC--
------SCTGTCAVTCAV
 A C T G A C G T A C G T G A T C C G A T A C T G T A G C G T A C A C G T T A C G C A G T C A T G C G T A A C T G A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GTTCWGCCTGKGAGTC
----RTCATGTGAC--
 A C T G A C G T A C G T G A T C C G A T A C T G T A G C G T A C A C G T T A C G C A G T C A T G C G T A A C T G A G C T A G T C
A C G T A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GTTCWGCCTGKGAGTC
-CACTTCCTGT-----
 A C T G A C G T A C G T G A T C C G A T A C T G T A G C G T A C A C G T T A C G C A G T C A T G C G T A A C T G A G C T A G T C
A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T

FOS/MA0476.1/Jaspar

Match Rank:8
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GTTCWGCCTGKGAGTC---
--------TGTGACTCATT
 A C T G A C G T A C G T G A T C C G A T A C T G T A G C G T A C A C G T T A C G C A G T C A T G C G T A A C T G A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:GTTCWGCCTGKGAGTC---
----TGCCTGCGYCMCCTT
 A C T G A C G T A C G T G A T C C G A T A C T G T A G C G T A C A C G T T A C G C A G T C A T G C G T A A C T G A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GTTCWGCCTGKGAGTC
NNAYTTCCTGHN----
 A C T G A C G T A C G T G A T C C G A T A C T G T A G C G T A C A C G T T A C G C A G T C A T G C G T A A C T G A G C T A G T C
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T A C G T A C G T A C G T