Information for 4-GTCTGCATCAGCTCCT (Motif 13)

A C T G A C G T A G T C C G A T A C T G A G T C T C G A A C G T A T G C C G T A A C T G A G T C A G C T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G C T G A A C T G A G T C A C G T A T C G C G T A A C G T A C T G A G T C C G T A A C T G C G T A A G T C
p-value:1e-7
log p-value:-1.670e+01
Information Content per bp:1.930
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 25.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GTCTGCATCAGCTCCT
VBSYGTCTGG----------
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G A T A C T G A G T C T C G A A C G T A T G C C G T A A C T G A G T C A G C T A G T C A G T C A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GTCTGCATCAGCTCCT----
---CTCAGCAGCTGCTACTG
 A C T G A C G T A G T C C G A T A C T G A G T C T C G A A C G T A T G C C G T A A C T G A G T C A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTCTGCATCAGCTCCT
CTGTCTGG----------
 A C G T A C G T A C T G A C G T A G T C C G A T A C T G A G T C T C G A A C G T A T G C C G T A A C T G A G T C A G C T A G T C A G T C A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GTCTGCATCAGCTCCT
TGAGTCAGCA---------
 A C G T A C G T A C G T A C T G A C G T A G T C C G A T A C T G A G T C T C G A A C G T A T G C C G T A A C T G A G T C A G C T A G T C A G T C A C G T
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:5
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GTCTGCATCAGCTCCT
------ATCAGCTGTT
 A C T G A C G T A G T C C G A T A C T G A G T C T C G A A C G T A T G C C G T A A C T G A G T C A G C T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGCATCAGCTCCT
TGCCTGCGYCMCCTT--
 A C G T A C T G A C G T A G T C C G A T A C T G A G T C T C G A A C G T A T G C C G T A A C T G A G T C A G C T A G T C A G T C A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GTCTGCATCAGCTCCT
------AGCAGCTGCT
 A C T G A C G T A G T C C G A T A C T G A G T C T C G A A C G T A T G C C G T A A C T G A G T C A G C T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTCTGCATCAGCTCCT
TGCTGASTCAGC----
 A C T G A C G T A G T C C G A T A C T G A G T C T C G A A C G T A T G C C G T A A C T G A G T C A G C T A G T C A G T C A C G T
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GTCTGCATCAGCTCCT
----NNAGCAGCTGCT
 A C T G A C G T A G T C C G A T A C T G A G T C T C G A A C G T A T G C C G T A A C T G A G T C A G C T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GTCTGCATCAGCTCCT
-ATTGCATCAK-----
 A C T G A C G T A G T C C G A T A C T G A G T C T C G A A C G T A T G C C G T A A C T G A G T C A G C T A G T C A G T C A C G T
A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T