Information for 6-TGGGAGGATGATC (Motif 10)

C A G T C T A G A C T G A C T G C T G A C T A G C T A G C G T A A C G T A C T G C G T A C G A T A G T C
Reverse Opposite:
T C A G C G T A A C G T G T A C C G T A G A C T A G T C A G T C A G C T T A G C G T A C G A T C G C T A
p-value:1e-7
log p-value:-1.793e+01
Information Content per bp:1.702
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif72.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets53.6 +/- 25.7bp
Average Position of motif in Background52.8 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0139.1_Pitx3/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGGGAGGATGATC----
-AGGGGGATTAGCTGCC
 C A G T C T A G A C T G A C T G C T G A C T A G C T A G C G T A A C G T A C T G C G T A C G A T A G T C A C G T A C G T A C G T A C G T
A C G T T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PH0123.1_Obox3/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGGGAGGATGATC---
TGAGGGGGATTAACTAT
 A C G T C A G T C T A G A C T G A C T G C T G A C T A G C T A G C G T A A C G T A C T G C G T A C G A T A G T C A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PH0122.1_Obox2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGGGAGGATGATC---
TGAGGGGGATTAACTAT
 A C G T C A G T C T A G A C T G A C T G C T G A C T A G C T A G C G T A A C G T A C T G C G T A C G A T A G T C A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGGGAGGATGATC
-GGGAGGACNG--
 C A G T C T A G A C T G A C T G C T G A C T A G C T A G C G T A A C G T A C T G C G T A C G A T A G T C
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGGGAGGATGATC---
TTAAGGGGATTAACTAC
 A C G T C A G T C T A G A C T G A C T G C T G A C T A G C T A G C G T A A C G T A C T G C G T A C G A T A G T C A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0015.1_Crx/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGGGAGGATGATC--
CGTTGGGGATTAGCCT
 A C G T C A G T C T A G A C T G A C T G C T G A C T A G C T A G C G T A A C G T A C T G C G T A C G A T A G T C A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

PH0137.1_Pitx1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGGGAGGATGATC---
TTAGAGGGATTAACAAT
 A C G T C A G T C T A G A C T G A C T G C T G A C T A G C T A G C G T A A C G T A C T G C G T A C G A T A G T C A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGGGAGGATGATC
---VRGGATTARN
 C A G T C T A G A C T G A C T G C T G A C T A G C T A G C G T A A C G T A C T G C G T A C G A T A G T C
A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGGGAGGATGATC--
CTACTAGGATGTNNTN
 A C G T C A G T C T A G A C T G A C T G C T G A C T A G C T A G C G T A A C G T A C T G C G T A C G A T A G T C A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TGGGAGGATGATC
----NGGATTAA-
 C A G T C T A G A C T G A C T G C T G A C T A G C T A G C G T A A C G T A C T G C G T A C G A T A G T C
A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T