Information for 9-AMTGCTHCGT (Motif 20)

C G T A G T A C G A C T C A T G A G T C A C G T G C T A A G T C T A C G A C G T
Reverse Opposite:
C G T A A T G C C T A G C G A T G T C A C T A G G T A C C G T A A C T G C G A T
p-value:1e-5
log p-value:-1.246e+01
Information Content per bp:1.724
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif53.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets37.0 +/- 26.6bp
Average Position of motif in Background51.6 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AMTGCTHCGT
---GCTCCG-
 C G T A G T A C G A C T C A T G A G T C A C G T G C T A A G T C T A C G A C G T
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

GMEB2/MA0862.1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AMTGCTHCGT--
----TTACGTAA
 C G T A G T A C G A C T C A T G A G T C A C G T G C T A A G T C T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AMTGCTHCGT
---GCTTCC-
 C G T A G T A C G A C T C A T G A G T C A C G T G C T A A G T C T A C G A C G T
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AMTGCTHCGT-----
ACATGCTACCTAATAC
 A C G T C G T A G T A C G A C T C A T G A G T C A C G T G C T A A G T C T A C G A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AMTGCTHCGT-----
ACTTGCTACCTACACC
 A C G T C G T A G T A C G A C T C A T G A G T C A C G T G C T A A G T C T A C G A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AMTGCTHCGT---
-----TACGTGCV
 C G T A G T A C G A C T C A T G A G T C A C G T G C T A A G T C T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AMTGCTHCGT--
--GGGTACGTGC
 C G T A G T A C G A C T C A T G A G T C A C G T G C T A A G T C T A C G A C G T A C G T A C G T
A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

Creb3l2/MA0608.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AMTGCTHCGT--
---GCCACGTGT
 C G T A G T A C G A C T C A T G A G T C A C G T G C T A A G T C T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T

CREB3L1/MA0839.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AMTGCTHCGT-----
-ATGCCACGTCATCA
 C G T A G T A C G A C T C A T G A G T C A C G T G C T A A G T C T A C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

Atf1/MA0604.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AMTGCTHCGT---
-----TACGTCAT
 C G T A G T A C G A C T C A T G A G T C A C G T G C T A A G T C T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T