Information for 5-CCTGTGTTAT (Motif 15)

A G T C A G T C C G A T A C T G G A C T A T C G A C G T A C G T C G T A A C G T
Reverse Opposite:
C G T A G C A T C G T A C G T A T A G C C T G A A G T C C G T A A C T G A C T G
p-value:1e-8
log p-value:-1.921e+01
Information Content per bp:1.858
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif3.21%
Number of Background Sequences with motif157.6
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets53.2 +/- 26.3bp
Average Position of motif in Background48.5 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCTGTGTTAT----
NCNTTTGTTATTTNN
 A C G T A G T C A G T C C G A T A C T G G A C T A T C G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CCTGTGTTAT---
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G G A C T A T C G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCTGTGTTAT
GCTGTG----
 A G T C A G T C C G A T A C T G G A C T A T C G A C G T A C G T C G T A A C G T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTGTGTTAT
CCTTTGTT--
 A G T C A G T C C G A T A C T G G A C T A T C G A C G T A C G T C G T A A C G T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CCTGTGTTAT---
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G G A C T A T C G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTGTGTTAT
CCTTTGTTTT
 A G T C A G T C C G A T A C T G G A C T A T C G A C G T A C G T C G T A A C G T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCTGTGTTAT------
NNCTTTGTTTTGNTNNN
 A C G T A G T C A G T C C G A T A C T G G A C T A T C G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCTGTGTTAT
GCTGTGGTTT
 A G T C A G T C C G A T A C T G G A C T A T C G A C G T A C G T C G T A A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCTGTGTTAT------
-NNNTGTTGTTGTTNG
 A G T C A G T C C G A T A C T G G A C T A T C G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCTGTGTTAT
GTCTGTGGTTT
 A C G T A G T C A G T C C G A T A C T G G A C T A T C G A C G T A C G T C G T A A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T