Information for 4-CTGGCTCTGCCTG (Motif 5)

T A G C C G A T A C T G A C T G A G T C A G C T A G T C A C G T A C T G G A T C A G T C G C A T A C T G
Reverse Opposite:
T G A C C G T A A C T G C A T G A G T C C G T A A C T G C T G A C T A G G T A C T G A C C G T A A T C G
p-value:1e-9
log p-value:-2.230e+01
Information Content per bp:1.744
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.58%
Number of Background Sequences with motif94.0
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets53.8 +/- 30.3bp
Average Position of motif in Background56.7 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CTGGCTCTGCCTG--
------CTGCCCGCA
 T A G C C G A T A C T G A C T G A G T C A G C T A G T C A C G T A C T G G A T C A G T C G C A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTGGCTCTGCCTG
---GCTCGGSCTC
 T A G C C G A T A C T G A C T G A G T C A G C T A G T C A C G T A C T G G A T C A G T C G C A T A C T G
A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CTGGCTCTGCCTG-
------TTGCCAAG
 T A G C C G A T A C T G A C T G A G T C A G C T A G T C A C G T A C T G G A T C A G T C G C A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTGGCTCTGCCTG
-----GCTGTG--
 T A G C C G A T A C T G A C T G A G T C A G C T A G T C A C G T A C T G G A T C A G T C G C A T A C T G
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTGGCTCTGCCTG--
---GCTCCGCCCMCY
 T A G C C G A T A C T G A C T G A G T C A G C T A G T C A C G T A C T G G A T C A G T C G C A T A C T G A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTGGCTCTGCCTG
---GGTCTGGCAT
 T A G C C G A T A C T G A C T G A G T C A G C T A G T C A C G T A C T G G A T C A G T C G C A T A C T G
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CTGGCTCTGCCTG-
------CTGTCTGG
 T A G C C G A T A C T G A C T G A G T C A G C T A G T C A C G T A C T G G A T C A G T C G C A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTGGCTCTGCCTG-
--GGCCCCGCCCCC
 T A G C C G A T A C T G A C T G A G T C A G C T A G T C A C G T A C T G G A T C A G T C G C A T A C T G A C G T
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTGGCTCTGCCTG-
----VGCTGWCAVB
 T A G C C G A T A C T G A C T G A G T C A G C T A G T C A C G T A C T G G A T C A G T C G C A T A C T G A C G T
A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CTGGCTCTGCCTG--
------ATGCCCACC
 T A G C C G A T A C T G A C T G A G T C A G C T A G T C A C G T A C T G G A T C A G T C G C A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C