Information for 7-TTCTGCCAAGATT (Motif 9)

A C G T A C G T G A T C A G C T T A C G G T A C A G T C G T C A C G T A A T C G C T G A C A G T A C G T
Reverse Opposite:
T C G A G C T A G A C T A T G C G C A T A C G T C T A G A C T G A G T C C T G A C A T G G T C A C G T A
p-value:1e-14
log p-value:-3.383e+01
Information Content per bp:1.766
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif59.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets51.1 +/- 28.8bp
Average Position of motif in Background47.7 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TTCTGCCAAGATT
--TTGCCAAG---
 A C G T A C G T G A T C A G C T T A C G G T A C A G T C G T C A C G T A A T C G C T G A C A G T A C G T
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTCTGCCAAGATT
-GGTGCCAAGT--
 A C G T A C G T G A T C A G C T T A C G G T A C A G T C G T C A C G T A A T C G C T G A C A G T A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TTCTGCCAAGATT
---TGCCAA----
 A C G T A C G T G A T C A G C T T A C G G T A C A G T C G T C A C G T A A T C G C T G A C A G T A C G T
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTCTGCCAAGATT
-CGTGCCAAG---
 A C G T A C G T G A T C A G C T T A C G G T A C A G T C G T C A C G T A A T C G C T G A C A G T A C G T
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTCTGCCAAGATT
--CTGCCCGCA--
 A C G T A C G T G A T C A G C T T A C G G T A C A G T C G T C A C G T A A T C G C T G A C A G T A C G T
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TTCTGCCAAGATT-
----GCAGTGATTT
 A C G T A C G T G A T C A G C T T A C G G T A C A G T C G T C A C G T A A T C G C T G A C A G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTCTGCCAAGATT
ANATTTTTGCAANTN--
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C A G C T T A C G G T A C A G T C G T C A C G T A A T C G C T G A C A G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TTCTGCCAAGATT-
---TGCTGTGATTT
 A C G T A C G T G A T C A G C T T A C G G T A C A G T C G T C A C G T A A T C G C T G A C A G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TTCTGCCAAGATT
---TGCCCAGNHW
 A C G T A C G T G A T C A G C T T A C G G T A C A G T C G T C A C G T A A T C G C T G A C A G T A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TTCTGCCAAGATT
--ATGCCAACC--
 A C G T A C G T G A T C A G C T T A C G G T A C A G T C G T C A C G T A A T C G C T G A C A G T A C G T
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T