p-value: | 1e-6 |
log p-value: | -1.559e+01 |
Information Content per bp: | 1.941 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.71% |
Number of Background Sequences with motif | 13.6 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 60.8 +/- 15.1bp |
Average Position of motif in Background | 58.2 +/- 24.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0170.1_Sox17_2/Jaspar
Match Rank: | 1 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AGATTCAGAC--- GACCACATTCATACAAT |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGATTCAGAC------ CAAATCCAGACATCACA |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 3 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AGATTCAGAC-- ----BCAGACWA |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AGATTCAGAC-- ----CCAGACAG |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AGATTCAGAC---- ----CCAGACRSVB |
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CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGATTCAGAC CGGTTTCAAA- |
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PB0178.1_Sox8_2/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGATTCAGAC---- ACATTCATGACACG |
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LIN54/MA0619.1/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGATTCAGAC -NATTCAAAT |
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TBX21/MA0690.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AGATTCAGAC--- ---TTCACACCTT |
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PB0013.1_Eomes_1/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGATTCAGAC------ NNTTTTCACACCTTNNN |
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