Information for 12-ACATCAAGCT (Motif 42)

C G T A A G T C C G T A A C G T A G T C C G T A C G T A A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C G T
p-value:1e-5
log p-value:-1.215e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.3 +/- 27.4bp
Average Position of motif in Background56.3 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ACATCAAGCT---
TCACCCATCAATAAACA
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.68
Offset:4
Orientation:forward strand
Alignment:ACATCAAGCT-
----CAAGCTT
 C G T A A G T C C G T A A C G T A G T C C G T A C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACATCAAGCT--
CCATCAATCAAA
 C G T A A G T C C G T A A C G T A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C G T
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

PB0144.1_Lef1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACATCAAGCT----
GAAGATCAATCACTTA
 A C G T A C G T C G T A A G T C C G T A A C G T A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACATCAAGCT
ACGTCA----
 C G T A A G T C C G T A A C G T A G T C C G T A C G T A A C T G A G T C A C G T
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACATCAAGCT----
GAAGATCAATCACTAA
 A C G T A C G T C G T A A G T C C G T A A C G T A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACATCAAGCT-
GYCATCMATCAT
 A C G T C G T A A G T C C G T A A C G T A G T C C G T A C G T A A C T G A G T C A C G T A C G T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

ZBTB18/MA0698.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACATCAAGCT-
NAACATCTGGATN
 A C G T A C G T C G T A A G T C C G T A A C G T A G T C C G T A C G T A A C T G A G T C A C G T A C G T
T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACATCAAGCT
TCATCAATCA
 C G T A A G T C C G T A A C G T A G T C C G T A C G T A A C T G A G T C A C G T
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

SPDEF/MA0686.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACATCAAGCT
TACATCCGGGT
 A C G T C G T A A G T C C G T A A C G T A G T C C G T A C G T A A C T G A G T C A C G T
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T