Information for 5-ATGACTAACAAAG (Motif 4)

C G T A A C G T A T C G C T G A A T G C C G A T C T G A C G T A A G T C C G T A C G T A G C T A A C T G
Reverse Opposite:
A G T C C A G T C G A T A C G T C T A G A C G T A G C T C G T A A T C G A G C T A T G C C G T A A C G T
p-value:1e-13
log p-value:-3.144e+01
Information Content per bp:1.822
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 16.0bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:1
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:ATGACTAACAAAG-
----VRRACAAWGG
 C G T A A C G T A T C G C T G A A T G C C G A T C T G A C G T A A G T C C G T A C G T A G C T A A C T G A C G T
A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.68
Offset:7
Orientation:reverse strand
Alignment:ATGACTAACAAAG
-------ACAAAG
 C G T A A C G T A T C G C T G A A T G C C G A T C T G A C G T A A G T C C G T A C G T A G C T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:ATGACTAACAAAG-
------RACAAWGG
 C G T A A C G T A T C G C T G A A T G C C G A T C T G A C G T A A G T C C G T A C G T A G C T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:ATGACTAACAAAG-
------AACAAAGG
 C G T A A C G T A T C G C T G A A T G C C G A T C T G A C G T A A G T C C G T A C G T A G C T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATGACTAACAAAG-----
-ATAAGAACAAAGGACTA
 C G T A A C G T A T C G C T G A A T G C C G A T C T G A C G T A A G T C C G T A C G T A G C T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATGACTAACAAAG-----
-AGAAGAACAAAGGACTA
 C G T A A C G T A T C G C T G A A T G C C G A T C T G A C G T A A G T C C G T A C G T A G C T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0108.1_Atf1_2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATGACTAACAAAG
GAATGACGAATAAC-
 A C G T A C G T C G T A A C G T A T C G C T G A A T G C C G A T C T G A C G T A A G T C C G T A C G T A G C T A A C T G
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:ATGACTAACAAAG-
----GGAACAAAGR
 C G T A A C G T A T C G C T G A A T G C C G A T C T G A C G T A A G T C C G T A C G T A G C T A A C T G A C G T
A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:ATGACTAACAAAG-
----VRAACAATGG
 C G T A A C G T A T C G C T G A A T G C C G A T C T G A C G T A A G T C C G T A C G T A G C T A A C T G A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

PB0119.1_Foxa2_2/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATGACTAACAAAG--
AAAAATAACAAACGG
 C G T A A C G T A T C G C T G A A T G C C G A T C T G A C G T A A G T C C G T A C G T A G C T A A C T G A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G