Information for 19-ACCCCAGCAGGAA (Motif 35)

G C T A G A T C G A T C T A G C A G T C C G T A T C A G T G A C C T G A C T A G T C A G G T C A C G T A
Reverse Opposite:
G C A T A C G T A G T C A G T C A G C T A C T G A G T C A C G T A C T G A T C G C T A G C T A G C G A T
p-value:1e-8
log p-value:-1.962e+01
Information Content per bp:1.704
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif260.2
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets36.0 +/- 24.5bp
Average Position of motif in Background50.8 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:ACCCCAGCAGGAA-
--CACAGCAGGGGG
 G C T A G A T C G A T C T A G C A G T C C G T A T C A G T G A C C T G A C T A G T C A G G T C A C G T A A C G T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ACCCCAGCAGGAA-
CCACACAGCAGGAGA
 A C G T G C T A G A T C G A T C T A G C A G T C C G T A T C A G T G A C C T G A C T A G T C A G G T C A C G T A A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ACCCCAGCAGGAA---
-DCHCAGCAGGRGGCC
 G C T A G A T C G A T C T A G C A G T C C G T A T C A G T G A C C T G A C T A G T C A G G T C A C G T A A C G T A C G T A C G T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ACCCCAGCAGGAA-
CCACACAGCAGGAGA
 A C G T G C T A G A T C G A T C T A G C A G T C C G T A T C A G T G A C C T G A C T A G T C A G G T C A C G T A A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACCCCAGCAGGAA-
GAGCACAGCAGGACA
 A C G T G C T A G A T C G A T C T A G C A G T C C G T A T C A G T G A C C T G A C T A G T C A G G T C A C G T A A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACCCCAGCAGGAA
-DCTCAGCAGG--
 G C T A G A T C G A T C T A G C A G T C C G T A T C A G T G A C C T G A C T A G T C A G G T C A C G T A
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACCCCAGCAGGAA
GTCCCCAGGGGA--
 A C G T G C T A G A T C G A T C T A G C A G T C C G T A T C A G T G A C C T G A C T A G T C A G G T C A C G T A
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACCCCAGCAGGAA
AAACCACAGC-----
 A C G T A C G T G C T A G A T C G A T C T A G C A G T C C G T A T C A G T G A C C T G A C T A G T C A G G T C A C G T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.60
Offset:5
Orientation:forward strand
Alignment:ACCCCAGCAGGAA--
-----ANCAGGAAGT
 G C T A G A T C G A T C T A G C A G T C C G T A T C A G T G A C C T G A C T A G T C A G G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACCCCAGCAGGAA
AAACCACAGAN----
 A C G T A C G T G C T A G A T C G A T C T A G C A G T C C G T A T C A G T G A C C T G A C T A G T C A G G T C A C G T A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T