Information for 8-TKAGTGMAASCCW (Motif 12)

A C G T A C G T C G T A A T C G A C G T A C T G G T A C C G T A C G T A A T C G A G T C A G T C C G A T
Reverse Opposite:
C G T A A C T G A C T G A T G C A C G T A C G T A C T G A G T C C G T A A T G C A C G T G T C A C G T A
p-value:1e-11
log p-value:-2.550e+01
Information Content per bp:1.876
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.2 +/- 21.0bp
Average Position of motif in Background54.0 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TKAGTGMAASCCW
TGAGTGACAGSC-
 A C G T A C G T C G T A A T C G A C G T A C T G G T A C C G T A C G T A A T C G A G T C A G T C C G A T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TKAGTGMAASCCW
--ACTGAAACCA-
 A C G T A C G T C G T A A T C G A C G T A C T G G T A C C G T A C G T A A T C G A G T C A G T C C G A T
A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TKAGTGMAASCCW
NTGATTGACAGN--
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G G T A C C G T A C G T A A T C G A G T C A G T C C G A T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TKAGTGMAASCCW
GAAAGTGAAAGT--
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G G T A C C G T A C G T A A T C G A G T C A G T C C G A T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TKAGTGMAASCCW
-AGATGCAATCCC
 A C G T A C G T C G T A A T C G A C G T A C T G G T A C C G T A C G T A A T C G A G T C A G T C C G A T
A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TKAGTGMAASCCW
BTGABTGACAGS--
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G G T A C C G T A C G T A A T C G A G T C A G T C C G A T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T

Six3/MA0631.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TKAGTGMAASCCW---
ANANGTGATACCCTATN
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G G T A C C G T A C G T A A T C G A G T C A G T C C G A T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TKAGTGMAASCCW---
ANANGTGATACCCTATN
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G G T A C C G T A C G T A A T C G A G T C A G T C C G A T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TKAGTGMAASCCW
-AGGTGHCAGACA
 A C G T A C G T C G T A A T C G A C G T A C T G G T A C C G T A C G T A A T C G A G T C A G T C C G A T
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TKAGTGMAASCCW---
ANANNTGATACCCNATN
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G G T A C C G T A C G T A A T C G A G T C A G T C C G A T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T