Information for 4-GATCTTGCTGTTCKTT (Motif 9)

A C T G G C T A G A C T A G T C A C G T A C G T A C T G G T A C A C G T A C T G A G C T A G C T A G T C C A T G A C G T A C G T
Reverse Opposite:
G T C A T C G A G T A C A C T G C T G A C T G A G T A C C G T A A C T G A G T C C G T A T C G A A C T G C G T A C A G T G T A C
p-value:1e-9
log p-value:-2.249e+01
Information Content per bp:1.694
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif5.31%
Number of Background Sequences with motif31.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets40.3 +/- 28.4bp
Average Position of motif in Background52.2 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GATCTTGCTGTTCKTT
NNTCCTGCTGTGNNN-
 A C T G G C T A G A C T A G T C A C G T A C G T A C T G G T A C A C G T A C T G A G C T A G C T A G T C C A T G A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GATCTTGCTGTTCKTT
TNTCCTGCTGTGNNG-
 A C T G G C T A G A C T A G T C A C G T A C G T A C T G G T A C A C G T A C T G A G C T A G C T A G T C C A T G A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GATCTTGCTGTTCKTT
TCNCCTGCTGNGNNN-
 A C T G G C T A G A C T A G T C A C G T A C G T A C T G G T A C A C G T A C T G A G C T A G C T A G T C C A T G A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GATCTTGCTGTTCKTT
CCCCCTGCTGTG----
 A C T G G C T A G A C T A G T C A C G T A C G T A C T G G T A C A C G T A C T G A G C T A G C T A G T C C A T G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GATCTTGCTGTTCKTT
---CCTGCTGAGH---
 A C T G G C T A G A C T A G T C A C G T A C G T A C T G G T A C A C G T A C T G A G C T A G C T A G T C C A T G A C G T A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GATCTTGCTGTTCKTT
GGCCYCCTGCTGDGH---
 A C G T A C G T A C T G G C T A G A C T A G T C A C G T A C G T A C T G G T A C A C G T A C T G A G C T A G C T A G T C C A T G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GATCTTGCTGTTCKTT
-AATTTGCTGAC----
 A C T G G C T A G A C T A G T C A C G T A C G T A C T G G T A C A C G T A C T G A G C T A G C T A G T C C A T G A C G T A C G T
A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GATCTTGCTGTTCKTT
--ACTTCCTGTT----
 A C T G G C T A G A C T A G T C A C G T A C G T A C T G G T A C A C G T A C T G A G C T A G C T A G T C C A T G A C G T A C G T
A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GATCTTGCTGTTCKTT
-AAANTGCTGACTNAG
 A C T G G C T A G A C T A G T C A C G T A C G T A C T G G T A C A C G T A C T G A G C T A G C T A G T C C A T G A C G T A C G T
A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GATCTTGCTGTTCKTT
--TCCAGATGTT----
 A C T G G C T A G A C T A G T C A C G T A C G T A C T G G T A C A C G T A C T G A G C T A G C T A G T C C A T G A C G T A C G T
A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T