Information for 1-CTAAACCACTATGCTT (Motif 3)

A G T C A C G T C G T A G T C A C G T A A G T C A G T C C T G A A G T C C G A T C G T A A C G T A C T G A G T C C G A T C G A T
Reverse Opposite:
C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A G C T A C T G A C T G A C G T A C G T A C G T C G T A A C T G
p-value:1e-11
log p-value:-2.745e+01
Information Content per bp:1.931
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.54%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.2 +/- 18.2bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTAAACCACTATGCTT
--AAACCACANN----
 A G T C A C G T C G T A G T C A C G T A A G T C A G T C C T G A A G T C C G A T C G T A A C G T A C T G A G T C C G A T C G A T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTAAACCACTATGCTT
--AAACCGCAA-----
 A G T C A C G T C G T A G T C A C G T A A G T C A G T C C T G A A G T C C G A T C G T A A C G T A C T G A G T C C G A T C G A T
A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTAAACCACTATGCTT
--AAACCGCAAA----
 A G T C A C G T C G T A G T C A C G T A A G T C A G T C C T G A A G T C C G A T C G T A A C G T A C T G A G T C C G A T C G A T
A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTAAACCACTATGCTT
-NAAACCACAG-----
 A G T C A C G T C G T A G T C A C G T A A G T C A G T C C T G A A G T C C G A T C G T A A C G T A C T G A G T C C G A T C G A T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTAAACCACTATGCTT--
--TACCCACAATGCATTG
 A G T C A C G T C G T A G T C A C G T A A G T C A G T C C T G A A G T C C G A T C G T A A C G T A C T G A G T C C G A T C G A T A C G T A C G T
A C G T A C G T A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

Crx/MA0467.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTAAACCACTATGCTT
CTAATCCTCTT-----
 A G T C A C G T C G T A G T C A C G T A A G T C A G T C C T G A A G T C C G A T C G T A A C G T A C T G A G T C C G A T C G A T
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTAAACCACTATGCTT
--AAACCACAGAN---
 A G T C A C G T C G T A G T C A C G T A A G T C A G T C C T G A A G T C C G A T C G T A A C G T A C T G A G T C C G A T C G A T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTAAACCACTATGCTT
-NWAACCACADNN---
 A G T C A C G T C G T A G T C A C G T A A G T C A G T C C T G A A G T C C G A T C G T A A C G T A C T G A G T C C G A T C G A T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTAAACCACTATGCTT
--AAACCACAGC----
 A G T C A C G T C G T A G T C A C G T A A G T C A G T C C T G A A G T C C G A T C G T A A C G T A C T G A G T C C G A T C G A T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CTAAACCACTATGCTT
AGGCTAATCCCCAANG---
 A C G T A C G T A C G T A G T C A C G T C G T A G T C A C G T A A G T C A G T C C T G A A G T C C G A T C G T A A C G T A C T G A G T C C G A T C G A T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G A C G T A C G T A C G T