Information for 2-CTATGGAAATACC (Motif 2)

A G T C C G A T C G T A A C G T A C T G A T C G C G T A C G T A C G T A A C G T C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T C G T A A C G T A C G T A C G T A T G C A G T C C G T A A C G T C G T A A C T G
p-value:1e-11
log p-value:-2.745e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.54%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.2 +/- 20.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU5F1B/MA0792.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CTATGGAAATACC
-TATGCAAAT---
 A G T C C G A T C G T A A C G T A C T G A T C G C G T A C G T A C G T A A C G T C G T A A G T C A G T C
A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CTATGGAAATACC
-TATGCAAAT---
 A G T C C G A T C G T A A C G T A C T G A T C G C G T A C G T A C G T A A C G T C G T A A G T C A G T C
A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CTATGGAAATACC-
----GGAAATTCCC
 A G T C C G A T C G T A A C G T A C T G A T C G C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTATGGAAATACC
ATATGCAAAT---
 A G T C C G A T C G T A A C G T A C T G A T C G C G T A C G T A C G T A A C G T C G T A A G T C A G T C
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTATGGAAATACC
TTATGCAAAT---
 A G T C C G A T C G T A A C G T A C T G A T C G C G T A C G T A C G T A A C G T C G T A A G T C A G T C
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CTATGGAAATACC-
----GGAAATTCCC
 A G T C C G A T C G T A A C G T A C T G A T C G C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CTATGGAAATACC-
----GGAAANCCCC
 A G T C C G A T C G T A A C G T A C T G A T C G C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

POU2F1/MA0785.1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTATGGAAATACC
AATATGCAAATT--
 A C G T A G T C C G A T C G T A A C G T A C T G A T C G C G T A C G T A C G T A A C G T C G T A A G T C A G T C
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CTATGGAAATACC-
----GGAAATCCCC
 A G T C C G A T C G T A A C G T A C T G A T C G C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTATGGAAATACC
-NATGGAAAAN--
 A G T C C G A T C G T A A C G T A C T G A T C G C G T A C G T A C G T A A C G T C G T A A G T C A G T C
A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T