Information for 5-ACTTRTRYAYAAGTAS (Motif 9)

C G T A A G T C A C G T C G A T C T A G A C G T C T A G A G C T C G T A A G T C C G T A C G T A A C T G A G C T C G T A A T G C
Reverse Opposite:
A T C G A C G T C T G A T A G C A C G T A C G T C T A G A C G T C T G A G A C T C G T A A G T C C G T A C G T A A C T G A C G T
p-value:1e-4
log p-value:-1.070e+01
Information Content per bp:1.852
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.6 +/- 29.7bp
Average Position of motif in Background27.1 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACTTRTRYAYAAGTAS
TNNATTATGCATANNTT-
 A C G T A C G T C G T A A G T C A C G T C G A T C T A G A C G T C T A G A G C T C G T A A G T C C G T A C G T A A C T G A G C T C G T A A T G C
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:2
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ACTTRTRYAYAAGTAS----
---TAAATACATGTAAAATT
 C G T A A G T C A C G T C G A T C T A G A C G T C T A G A G C T C G T A A G T C C G T A C G T A A C T G A G C T C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ACTTRTRYAYAAGTAS----
---AATATACATGTAATATA
 C G T A A G T C A C G T C G A T C T A G A C G T C T A G A G C T C G T A A G T C C G T A C G T A A C T G A G C T C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:forward strand
Alignment:ACTTRTRYAYAAGTAS----
---AAAATACATGTAATACT
 C G T A A G T C A C G T C G A T C T A G A C G T C T A G A G C T C G T A A G T C C G T A C G T A A C T G A G C T C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0087.1_Irx6/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:ACTTRTRYAYAAGTAS----
---AAAATACATGTAAAAAT
 C G T A A G T C A C G T C G A T C T A G A C G T C T A G A G C T C G T A A G T C C G T A C G T A A C T G A G C T C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PB0080.1_Tbp_1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ACTTRTRYAYAAGTAS
TCTTTATATATAAATA-
 A C G T C G T A A G T C A C G T C G A T C T A G A C G T C T A G A G C T C G T A A G T C C G T A C G T A A C T G A G C T C G T A A T G C
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A A C G T

HLTF/MA0109.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ACTTRTRYAYAAGTAS
AACCTTATAT--------
 A C G T A C G T C G T A A G T C A C G T C G A T C T A G A C G T C T A G A G C T C G T A A G T C C G T A C G T A A C T G A G C T C G T A A T G C
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:ACTTRTRYAYAAGTAS----
---AATATACATGTAAAATT
 C G T A A G T C A C G T C G A T C T A G A C G T C T A G A G C T C G T A A G T C C G T A C G T A A C T G A G C T C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0085.1_Irx4/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:ACTTRTRYAYAAGTAS---
--NNTTTTACATGTANNNT
 C G T A A G T C A C G T C G A T C T A G A C G T C T A G A G C T C G T A A G T C C G T A C G T A A C T G A G C T C G T A A T G C A C G T A C G T A C G T
A C G T A C G T G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:ACTTRTRYAYAAGTAS-
--AYATGYATATGCATR
 C G T A A G T C A C G T C G A T C T A G A C G T C T A G A G C T C G T A A G T C C G T A C G T A A C T G A G C T C G T A A T G C A C G T
A C G T A C G T C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G