Information for 4-CAGGACACTAACC (Motif 6)

A G T C C G T A A T C G A C T G C G T A A G T C G T C A A G T C A C G T C T G A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G C T C G T A A C T G A C G T A C T G A C G T A G T C A T G C A C G T A C T G
p-value:1e-6
log p-value:-1.428e+01
Information Content per bp:1.945
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 21.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CAGGACACTAACC
-RGGGCACTAACY
 A G T C C G T A A T C G A C T G C G T A A G T C G T C A A G T C A C G T C T G A C G T A A G T C A G T C
A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CAGGACACTAACC
-AGGTCTCTAACC
 A G T C C G T A A T C G A C T G C G T A A G T C G T C A A G T C A C G T C T G A C G T A A G T C A G T C
A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CAGGACACTAACC-
NAGGTCANTGACCT
 A G T C C G T A A T C G A C T G C G T A A G T C G T C A A G T C A C G T C T G A C G T A A G T C A G T C A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CAGGACACTAACC--
----NNACTTACCTN
 A G T C C G T A A T C G A C T G C G T A A G T C G T C A A G T C A C G T C T G A C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAGGACACTAACC
AAGGTCAC-----
 A G T C C G T A A T C G A C T G C G T A A G T C G T C A A G T C A C G T C T G A C G T A A G T C A G T C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAGGACACTAACC
TRAGGTCA------
 A C G T A G T C C G T A A T C G A C T G C G T A A G T C G T C A A G T C A C G T C T G A C G T A A G T C A G T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAGGACACTAACC
NACAGGAAAT-----
 A C G T A C G T A G T C C G T A A T C G A C T G C G T A A G T C G T C A A G T C A C G T C T G A C G T A A G T C A G T C
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAGGACACTAACC--
ATTGGACTTTGACCCC
 A C G T A G T C C G T A A T C G A C T G C G T A A G T C G T C A A G T C A C G T C T G A C G T A A G T C A G T C A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CAGGACACTAACC
NACAGGAAAT-----
 A C G T A C G T A G T C C G T A A T C G A C T G C G T A A G T C G T C A A G T C A C G T C T G A C G T A A G T C A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CAGGACACTAACC-
ATAAATGACACCTATCA
 A C G T A C G T A C G T A G T C C G T A A T C G A C T G C G T A A G T C G T C A A G T C A C G T C T G A C G T A A G T C A G T C A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A