Information for 1-YTTGMAAKCA (Motif 5)

A G T C A C G T A C G T A C T G G T C A C G T A C G T A A C T G A T G C C T G A
Reverse Opposite:
A G C T A T C G G T A C A C G T A C G T A C G T A G T C G T C A C G T A C T A G
p-value:1e-8
log p-value:-1.905e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif118.5
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets65.0 +/- 16.8bp
Average Position of motif in Background51.7 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--YTTGMAAKCA-----
AAGGCGAAATCATCGCA
 A C G T A C G T A G T C A C G T A C G T A C T G G T C A C G T A C G T A A C T G A T G C C T G A A C G T A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:YTTGMAAKCA
ACTGAAACCA
 A G T C A C G T A C G T A C T G G T C A C G T A C G T A A C T G A T G C C T G A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:YTTGMAAKCA
TTTGAAACCG
 A G T C A C G T A C G T A C T G G T C A C G T A C G T A A C T G A T G C C T G A
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:YTTGMAAKCA-
---CCAATCAA
 A G T C A C G T A C G T A C T G G T C A C G T A C G T A A C T G A T G C C T G A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

BCL6B/MA0731.1/Jaspar

Match Rank:5
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------YTTGMAAKCA
TGAATTCCTAGAAAGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G G T C A C G T A C G T A A C T G A T G C C T G A
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:YTTGMAAKCA---
---CAAATCACTG
 A G T C A C G T A C G T A C T G G T C A C G T A C G T A A C T G A T G C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:YTTGMAAKCA
-TTGACAGC-
 A G T C A C G T A C G T A C T G G T C A C G T A C G T A A C T G A T G C C T G A
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----YTTGMAAKCA
ANATTTTTGCAANTN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G G T C A C G T A C G T A A C T G A T G C C T G A
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---YTTGMAAKCA
NATTGTGCAAT--
 A C G T A C G T A C G T A G T C A C G T A C G T A C T G G T C A C G T A C G T A A C T G A T G C C T G A
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:YTTGMAAKCA
---GTAAACA
 A G T C A C G T A C G T A C T G G T C A C G T A C G T A A C T G A T G C C T G A
A C G T A C G T A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A