Information for 2-TGTTGGACTCAAACAG (Motif 3)

A C G T A T C G A C G T A C G T A C T G C T A G C G T A G T A C A C G T A T G C C G T A G T C A C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C G T A C G T A C G T A T C G G T C A A C T G A C G T A G T C A G T C C G T A C G T A A T G C C G T A
p-value:1e-12
log p-value:-2.766e+01
Information Content per bp:1.927
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif7.41%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.8 +/- 3.3bp
Average Position of motif in Background46.9 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0014.1_Cphx/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGTTGGACTCAAACAG
ATGATCGAATCAAA---
 A C G T A C G T A T C G A C G T A C G T A C T G C T A G C G T A G T A C A C G T A T G C C G T A G T C A C G T A A G T C C G T A A C T G
C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGTTGGACTCAAACAG
NNATTGGACTTTNGNN-
 A C G T A C G T A T C G A C G T A C G T A C T G C T A G C G T A G T A C A C G T A T G C C G T A G T C A C G T A A G T C C G T A A C T G
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TGTTGGACTCAAACAG
------AAATAAACA-
 A C G T A T C G A C G T A C G T A C T G C T A G C G T A G T A C A C G T A T G C C G T A G T C A C G T A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.48
Offset:11
Orientation:reverse strand
Alignment:TGTTGGACTCAAACAG-
-----------CACAGN
 A C G T A T C G A C G T A C G T A C T G C T A G C G T A G T A C A C G T A T G C C G T A G T C A C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

FOS::JUN/MA0099.2/Jaspar

Match Rank:5
Score:0.48
Offset:4
Orientation:forward strand
Alignment:TGTTGGACTCAAACAG
----TGACTCA-----
 A C G T A T C G A C G T A C G T A C T G C T A G C G T A G T A C A C G T A T G C C G T A G T C A C G T A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.47
Offset:9
Orientation:forward strand
Alignment:TGTTGGACTCAAACAG---
---------NHAACBGYYV
 A C G T A T C G A C G T A C G T A C T G C T A G C G T A G T A C A C G T A T G C C G T A G T C A C G T A A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.47
Offset:4
Orientation:forward strand
Alignment:TGTTGGACTCAAACAG-----
----CGACCCAATCAACGGTG
 A C G T A T C G A C G T A C G T A C T G C T A G C G T A G T A C A C G T A T G C C G T A G T C A C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:8
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:TGTTGGACTCAAACAG
--------GTAAACAG
 A C G T A T C G A C G T A C G T A C T G C T A G C G T A G T A C A C G T A T G C C G T A G T C A C G T A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.47
Offset:3
Orientation:forward strand
Alignment:TGTTGGACTCAAACAG
---CGGTTTCAAA---
 A C G T A T C G A C G T A C G T A C T G C T A G C G T A G T A C A C G T A T G C C G T A G T C A C G T A A G T C C G T A A C T G
A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.46
Offset:3
Orientation:forward strand
Alignment:TGTTGGACTCAAACAG
---AGGTCTCTAACC-
 A C G T A T C G A C G T A C G T A C T G C T A G C G T A G T A C A C G T A T G C C G T A G T C A C G T A A G T C C G T A A C T G
A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T