Information for 1-CAAAACCAAAAAGCAA (Motif 2)

A G T C C G T A C G T A G T C A C G T A A G T C A G T C C T G A G T C A C G T A C G T A C G T A A C T G A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C C G A T A C G T A C G T A C G T A G C T A C T G A C T G A C G T A C G T A C G T C G A T A C T G
p-value:1e-13
log p-value:-3.043e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif7.41%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.2 +/- 21.0bp
Average Position of motif in Background38.9 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAAAACCAAAAAGCAA
--AAACCACANN----
 A G T C C G T A C G T A G T C A C G T A A G T C A G T C C T G A G T C A C G T A C G T A C G T A A C T G A G T C C G T A C G T A
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAAAACCAAAAAGCAA
--AAACCGCAAA----
 A G T C C G T A C G T A G T C A C G T A A G T C A G T C C T G A G T C A C G T A C G T A C G T A A C T G A G T C C G T A C G T A
A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAAAACCAAAAAGCAA
--AAACCACAGAN---
 A G T C C G T A C G T A G T C A C G T A A G T C A G T C C T G A G T C A C G T A C G T A C G T A A C T G A G T C C G T A C G T A
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAAAACCAAAAAGCAA
-NWAACCACADNN---
 A G T C C G T A C G T A G T C A C G T A A G T C A G T C C T G A G T C A C G T A C G T A C G T A A C T G A G T C C G T A C G T A
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAAAACCAAAAAGCAA
-NAAACCACAG-----
 A G T C C G T A C G T A G T C A C G T A A G T C A G T C C T G A G T C A C G T A C G T A C G T A A C T G A G T C C G T A C G T A
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CAAAACCAAAAAGCAA
ATATCAAAACAAAACA----
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A G T C A C G T A A G T C A G T C C T G A G T C A C G T A C G T A C G T A A C T G A G T C C G T A C G T A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T A C G T A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CAAAACCAAAAAGCAA
CTGATCGAAACCAAAGT----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A G T C A C G T A A G T C A G T C C T G A G T C A C G T A C G T A C G T A A C T G A G T C C G T A C G T A
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAAAACCAAAAAGCAA
AACAAACAACAAGAG-
 A G T C C G T A C G T A G T C A C G T A A G T C A G T C C T G A G T C A C G T A C G T A C G T A A C T G A G T C C G T A C G T A
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAAAACCAAAAAGCAA
--AAACCGCAA-----
 A G T C C G T A C G T A G T C A C G T A A G T C A G T C C T G A G T C A C G T A C G T A C G T A A C T G A G T C C G T A C G T A
A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAAAACCAAAAAGCAA
--AAACCACAGC----
 A G T C C G T A C G T A G T C A C G T A A G T C A G T C C T G A G T C A C G T A C G T A C G T A A C T G A G T C C G T A C G T A
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T