Information for 11-TGACCTCGAC (Motif 36)

A C G T A C T G C G T A A G T C A G T C A C G T A G T C A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C T G C G T A A C T G A C T G A C G T A G T C C G T A
p-value:1e-6
log p-value:-1.472e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.3 +/- 20.7bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-TGACCTCGAC
NTGACCTTGA-
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A G T C A C T G C G T A A G T C
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TGACCTCGAC
TGACCTTGAT
 A C G T A C T G C G T A A G T C A G T C A C G T A G T C A C T G C G T A A G T C
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

ESRRB/MA0141.3/Jaspar

Match Rank:3
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--TGACCTCGAC
NATGACCTTGA-
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A G T C A C T G C G T A A G T C
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TGACCTCGAC
TGACCTYA--
 A C G T A C T G C G T A A G T C A G T C A C G T A G T C A C T G C G T A A G T C
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TGACCTCGAC
TGACCYCT--
 A C G T A C T G C G T A A G T C A G T C A C G T A G T C A C T G C G T A A G T C
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTCGAC
ATGACCTTGA-
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A G T C A C T G C G T A A G T C
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGACCTCGAC
TGACCTTGAV
 A C G T A C T G C G T A A G T C A G T C A C G T A G T C A C T G C G T A A G T C
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Esrra/MA0592.2/Jaspar

Match Rank:8
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTCGAC
ATGACCTTGAA
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A G T C A C T G C G T A A G T C
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----TGACCTCGAC--
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A G T C A C T G C G T A A G T C A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGACCTCGAC
TGACCT----
 A C G T A C T G C G T A A G T C A G T C A C G T A G T C A C T G C G T A A G T C
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T