Information for 6-ATWAAGCTACCTW (Motif 9)

G T C A A C G T C G T A C G T A C G T A C T A G A G T C A C G T C T G A A G T C G T A C A C G T C G A T
Reverse Opposite:
C G T A C G T A A C T G A C T G A G C T C G T A C T A G A G T C A C G T A C G T C G A T C G T A A C G T
p-value:1e-11
log p-value:-2.540e+01
Information Content per bp:1.909
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.0 +/- 21.5bp
Average Position of motif in Background44.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ATWAAGCTACCTW----
-ACATGCTACCTAATAC
 G T C A A C G T C G T A C G T A C G T A C T A G A G T C A C G T C T G A A G T C G T A C A C G T C G A T A C G T A C G T A C G T A C G T
A C G T C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ATWAAGCTACCTW----
-ACTTGCTACCTACACC
 G T C A A C G T C G T A C G T A C G T A C T A G A G T C A C G T C T G A A G T C G T A C A C G T C G A T A C G T A C G T A C G T A C G T
A C G T C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ATWAAGCTACCTW----
-TNNTGCTACTGTNNNN
 G T C A A C G T C G T A C G T A C G T A C T A G A G T C A C G T C T G A A G T C G T A C A C G T C G A T A C G T A C G T A C G T A C G T
A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATWAAGCTACCTW
NGYCATAAAWCH-----
 A C G T A C G T A C G T A C G T G T C A A C G T C G T A C G T A C G T A C T A G A G T C A C G T C T G A A G T C G T A C A C G T C G A T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ATWAAGCTACCTW----
-CNNNGCTACTGTANNN
 G T C A A C G T C G T A C G T A C G T A C T A G A G T C A C G T C T G A A G T C G T A C A C G T C G A T A C G T A C G T A C G T A C G T
A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ATWAAGCTACCTW
--CAAGCTT----
 G T C A A C G T C G T A C G T A C G T A C T A G A G T C A C G T C T G A A G T C G T A C A C G T C G A T
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ATWAAGCTACCTW
GCAATAAAA-------
 A C G T A C G T A C G T G T C A A C G T C G T A C G T A C G T A C T A G A G T C A C G T C T G A A G T C G T A C A C G T C G A T
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----ATWAAGCTACCTW
GGCCATAAATCA-----
 A C G T A C G T A C G T A C G T G T C A A C G T C G T A C G T A C G T A C T A G A G T C A C G T C T G A A G T C G T A C A C G T C G A T
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ATWAAGCTACCTW
ATTAAA-------
 G T C A A C G T C G T A C G T A C G T A C T A G A G T C A C G T C T G A A G T C G T A C A C G T C G A T
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ATWAAGCTACCTW
CTAATTAA--------
 A C G T A C G T A C G T G T C A A C G T C G T A C G T A C G T A C T A G A G T C A C G T C T G A A G T C G T A C A C G T C G A T
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T