Information for 3-GTTGAGGTTTCCG (Motif 4)

A C T G A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T C G A T A G T C G T A C C A T G
Reverse Opposite:
G T A C C A T G A C T G C G T A C G T A C G T A A G T C A G T C C G A T A G T C C G T A G T C A A G T C
p-value:1e-13
log p-value:-3.077e+01
Information Content per bp:1.882
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.0 +/- 16.5bp
Average Position of motif in Background53.7 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GTTGAGGTTTCCG
NNTGTGGTTT---
 A C T G A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T C G A T A G T C G T A C C A T G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GTTGAGGTTTCCG
-TTGCGGTTT---
 A C T G A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T C G A T A G T C G T A C C A T G
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GTTGAGGTTTCCG
-CTGTGGTTTN--
 A C T G A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T C G A T A G T C G T A C C A T G
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTTGAGGTTTCCG
TTTGCGGTTT---
 A C T G A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T C G A T A G T C G T A C C A T G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GTTGAGGTTTCCG
GCTGTGGTTT---
 A C T G A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T C G A T A G T C G T A C C A T G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GTTGAGGTTTCCG
GTCTGTGGTTT---
 A C G T A C T G A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T C G A T A G T C G T A C C A T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:GTTGAGGTTTCCG-
----TGGTTTCAGT
 A C T G A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T C G A T A G T C G T A C C A T G A C G T
A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTTGAGGTTTCCG
NNHTGTGGTTWN--
 A C G T A C T G A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T C G A T A G T C G T A C C A T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTTGAGGTTTCCG
AGTTTCGGTTTCGN
 A C G T A C T G A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T C G A T A G T C G T A C C A T G
C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTTGAGGTTTCCG
TGCTGTGATTT---
 A C G T A C T G A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T C G A T A G T C G T A C C A T G
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T