Information for 2-CCASTARGTGGNA (Motif 2)

A G T C A G T C C T G A A T G C G A C T C G T A C T A G T C A G A C G T A C T G A C T G G A C T C T G A
Reverse Opposite:
G A C T C T G A T G A C G T A C G T C A A G T C G A T C C G A T C T G A T A C G G A C T C T A G A C T G
p-value:1e-22
log p-value:-5.066e+01
Information Content per bp:1.627
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif4.04%
Number of Background Sequences with motif179.0
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets55.4 +/- 25.2bp
Average Position of motif in Background49.3 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---CCASTARGTGGNA----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A G T C C T G A A T G C G A C T C G T A C T A G T C A G A C G T A C T G A C T G G A C T C T G A A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---CCASTARGTGGNA---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A G T C C T G A A T G C G A C T C G T A C T A G T C A G A C G T A C T G A C T G G A C T C T G A A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CCASTARGTGGNA------
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A G T C C T G A A T G C G A C T C G T A C T A G T C A G A C G T A C T G A C T G G A C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCASTARGTGGNA
ATCCAC---------
 A C G T A C G T A G T C A G T C C T G A A T G C G A C T C G T A C T A G T C A G A C G T A C T G A C T G G A C T C T G A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCASTARGTGGNA
ACAGGATGTGGT-
 A G T C A G T C C T G A A T G C G A C T C G T A C T A G T C A G A C G T A C T G A C T G G A C T C T G A
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCASTARGTGGNA
CACAGCAGGGGG--
 A C G T A G T C A G T C C T G A A T G C G A C T C G T A C T A G T C A G A C G T A C T G A C T G G A C T C T G A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCASTARGTGGNA
TGCCAA---------
 A C G T A C G T A G T C A G T C C T G A A T G C G A C T C G T A C T A G T C A G A C G T A C T G A C T G G A C T C T G A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCASTARGTGGNA
DCHCAGCAGGRGGCC
 A C G T A C G T A G T C A G T C C T G A A T G C G A C T C G T A C T A G T C A G A C G T A C T G A C T G G A C T C T G A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCASTARGTGGNA
NWAACCACADNN-----
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A A T G C G A C T C G T A C T A G T C A G A C G T A C T G A C T G G A C T C T G A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCASTARGTGGNA
NNVCAGCTGB-----
 A C G T A C G T A G T C A G T C C T G A A T G C G A C T C G T A C T A G T C A G A C G T A C T G A C T G G A C T C T G A
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T A C G T A C G T A C G T