Information for 9-CCAGAGTAATGCC (Motif 16)

A G T C A G T C C G T A A C T G C G T A A C T G C G A T G T C A C G T A A C G T A C T G A T G C A G T C
Reverse Opposite:
A C T G A T C G G T A C C G T A A C G T A C G T G C T A A G T C A C G T A G T C A C G T A C T G A C T G
p-value:1e-9
log p-value:-2.195e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 19.3bp
Average Position of motif in Background58.8 +/- 2.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCAGAGTAATGCC-
--TGATTRATGGCY
 A G T C A G T C C G T A A C T G C G T A A C T G C G A T G T C A C G T A A C G T A C T G A T G C A G T C A C G T
A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.54
Offset:8
Orientation:forward strand
Alignment:CCAGAGTAATGCC----
--------ATGCCCACC
 A G T C A G T C C G T A A C T G C G T A A C T G C G A T G T C A C G T A A C G T A C T G A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCAGAGTAATGCC
ATGCCAGACN------
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C T G C G A T G T C A C G T A A C G T A C T G A T G C A G T C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCAGAGTAATGCC
NTGCTGAGTCATCCN
 A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C T G C G A T G T C A C G T A A C G T A C T G A T G C A G T C
T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CCAGAGTAATGCC-
------TAATCCCN
 A G T C A G T C C G T A A C T G C G T A A C T G C G A T G T C A C G T A A C G T A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCAGAGTAATGCC------
----AGAAATGACTTCCCT
 A G T C A G T C C G T A A C T G C G T A A C T G C G A T G T C A C G T A A C G T A C T G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

TEAD3/MA0808.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CCAGAGTAATGCC
----TGGAATGT-
 A G T C A G T C C G T A A C T G C G T A A C T G C G A T G T C A C G T A A C G T A C T G A T G C A G T C
A C G T A C G T A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.52
Offset:8
Orientation:forward strand
Alignment:CCAGAGTAATGCC----
--------ATGCCAACC
 A G T C A G T C C G T A A C T G C G T A A C T G C G A T G T C A C G T A A C G T A C T G A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Nfe2l2/MA0150.2/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCAGAGTAATGCC-
TGCTGAGTCATNNTG
 A C G T A G T C A G T C C G T A A C T G C G T A A C T G C G A T G T C A C G T A A C G T A C T G A T G C A G T C A C G T
G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCAGAGTAATGCC
--TGATTGATGA-
 A G T C A G T C C G T A A C T G C G T A A C T G C G A T G T C A C G T A A C G T A C T G A T G C A G T C
A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T