Information for 5-WKCAAAGWCTGTGAWK (Motif 13)

C G A T C A T G A G T C C G T A T G C A C G T A A T C G C G A T A G T C C G A T A C T G A C G T T A C G G T C A C G T A A C T G
Reverse Opposite:
T G A C C G A T C A G T A T G C G T C A T G A C C G T A A C T G G C T A A T G C A C G T A C G T C G A T C T A G G T A C C G T A
p-value:1e-6
log p-value:-1.583e+01
Information Content per bp:1.673
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif136.6
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets48.1 +/- 26.2bp
Average Position of motif in Background50.8 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--WKCAAAGWCTGTGAWK
ACATCAAAGG--------
 A C G T A C G T C G A T C A T G A G T C C G T A T G C A C G T A A T C G C G A T A G T C C G A T A C T G A C G T T A C G G T C A C G T A A C T G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----WKCAAAGWCTGTGAWK
AAAGATCAAAGGAA------
 A C G T A C G T A C G T A C G T C G A T C A T G A G T C C G T A T G C A C G T A A T C G C G A T A G T C C G A T A C T G A C G T T A C G G T C A C G T A A C T G
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--WKCAAAGWCTGTGAWK
ACATCAAAGGNA------
 A C G T A C G T C G A T C A T G A G T C C G T A T G C A C G T A A T C G C G A T A G T C C G A T A C T G A C G T T A C G G T C A C G T A A C T G
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:WKCAAAGWCTGTGAWK
-----WDNCTGGGCA-
 C G A T C A T G A G T C C G T A T G C A C G T A A T C G C G A T A G T C C G A T A C T G A C G T T A C G G T C A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-WKCAAAGWCTGTGAWK
VAGRACAKNCTGTBC--
 A C G T C G A T C A T G A G T C C G T A T G C A C G T A A T C G C G A T A G T C C G A T A C T G A C G T T A C G G T C A C G T A A C T G
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:WKCAAAGWCTGTGAWK
----TWGTCTGV----
 C G A T C A T G A G T C C G T A T G C A C G T A A T C G C G A T A G T C C G A T A C T G A C G T T A C G G T C A C G T A A C T G
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--WKCAAAGWCTGTGAWK
ACWTCAAAGG--------
 A C G T A C G T C G A T C A T G A G T C C G T A T G C A C G T A A T C G C G A T A G T C C G A T A C T G A C G T T A C G G T C A C G T A A C T G
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----WKCAAAGWCTGTGAWK
TATAGATCAAAGGAAAA----
 A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C C G T A T G C A C G T A A T C G C G A T A G T C C G A T A C T G A C G T T A C G G T C A C G T A A C T G
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A A C G T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----WKCAAAGWCTGTGAWK
NNNAGATCAAAGGANNN----
 A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C C G T A T G C A C G T A A T C G C G A T A G T C C G A T A C T G A C G T T A C G G T C A C G T A A C T G
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T A C G T A C G T A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:WKCAAAGWCTGTGAWK
AGNACAGNCTGTTCTN
 C G A T C A T G A G T C C G T A T G C A C G T A A T C G C G A T A G T C C G A T A C T G A C G T T A C G G T C A C G T A A C T G
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T