Information for 3-CACCAGGGTTTRC (Motif 7)

A G T C G C T A G T A C A G T C C G T A A C T G A C T G A C T G A C G T A C G T G A C T C T A G A G T C
Reverse Opposite:
A C T G A G T C C T G A G T C A G T C A A G T C A G T C A G T C C G A T A C T G A C T G C A G T A C T G
p-value:1e-13
log p-value:-3.139e+01
Information Content per bp:1.821
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 20.8bp
Average Position of motif in Background60.6 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CACCAGGGTTTRC-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C G C T A G T A C A G T C C G T A A C T G A C T G A C T G A C G T A C G T G A C T C T A G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CACCAGGGTTTRC--
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A G T C G C T A G T A C A G T C C G T A A C T G A C T G A C T G A C G T A C G T G A C T C T A G A G T C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACCAGGGTTTRC
GTCCCCAGGGGA---
 A C G T A C G T A G T C G C T A G T A C A G T C C G T A A C T G A C T G A C T G A C G T A C G T G A C T C T A G A G T C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACCAGGGTTTRC
CACAGCAGGGGG---
 A C G T A C G T A G T C G C T A G T A C A G T C C G T A A C T G A C T G A C T G A C G T A C G T G A C T C T A G A G T C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CACCAGGGTTTRC
DCHCAGCAGGRGGCC-
 A C G T A C G T A C G T A G T C G C T A G T A C A G T C C G T A A C T G A C T G A C T G A C G T A C G T G A C T C T A G A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CACCAGGGTTTRC
NCCCCCCCGGGGGGN-
 A C G T A C G T A C G T A G T C G C T A G T A C A G T C C G T A A C T G A C T G A C T G A C G T A C G T G A C T C T A G A G T C
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CACCAGGGTTTRC
ACCCCCCCGGGGGGN-
 A C G T A C G T A C G T A G T C G C T A G T A C A G T C C G T A A C T G A C T G A C T G A C G T A C G T G A C T C T A G A G T C
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CACCAGGGTTTRC---
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C G C T A G T A C A G T C C G T A A C T G A C T G A C T G A C G T A C G T G A C T C T A G A G T C A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Znf423/MA0116.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CACCAGGGTTTRC
GGCACCCAGGGGTGC-
 A C G T A C G T A C G T A G T C G C T A G T A C A G T C C G T A A C T G A C T G A C T G A C G T A C G T G A C T C T A G A G T C
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CACCAGGGTTTRC
NGTCCCNNGGGA----
 A C G T A C G T A C G T A G T C G C T A G T A C A G T C C G T A A C T G A C T G A C T G A C G T A C G T G A C T C T A G A G T C
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T A C G T