Information for 16-GAGTTGAGTA (Motif 46)

A C T G C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T A G T C
p-value:1e-5
log p-value:-1.213e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.3 +/- 7.4bp
Average Position of motif in Background57.8 +/- 3.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GAGTTGAGTA---
--CTTGAGTGGCT
 A C T G C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

CEBPB/MA0466.2/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAGTTGAGTA--
--ATTGCGCAAT
 A C T G C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T
A C G T A C G T T C G A C A G T A C G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T

CEBPE/MA0837.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAGTTGAGTA--
--ATTGCGCAAT
 A C T G C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T
A C G T A C G T T C G A C G A T C A G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAGTTGAGTA--
--CTYRAGTGSY
 A C T G C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

CEBPG/MA0838.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAGTTGAGTA--
--ATTGCGCAAT
 A C T G C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T
A C G T A C G T T C G A G C A T G A C T C T A G G A T C C T A G G A T C G T C A G T C A A G C T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAGTTGAGTA
TAATTGATTA
 A C T G C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C G T C G T A
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

CEBPD/MA0836.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAGTTGAGTA--
--ATTGCGCAAT
 A C T G C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T
A C G T A C G T T C G A A C G T C A G T C A T G A G T C C T A G G A T C G T C A G T C A A G C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAGTTGAGTA---
---TTAAGTGCTT
 A C T G C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGTTGAGTA-
CAGGTAAGTAT
 A C T G C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

PH0117.1_Nkx3-1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGTTGAGTA-------
NATTTAAGTACTTANNA
 A C T G C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A