Information for 18-CTAGCCGGTCGTA (Motif 42)

G A T C G A C T C G T A T A C G T A G C G T A C C T A G A T C G C A G T A T G C T A C G G A C T C G T A
Reverse Opposite:
G C A T C T G A A T G C T A C G G C T A T A G C G A T C C A T G A T C G A T G C G C A T C T G A C A T G
p-value:1e-7
log p-value:-1.652e+01
Information Content per bp:1.557
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif229.9
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets53.1 +/- 20.0bp
Average Position of motif in Background47.9 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTAGCCGGTCGTA
NNACTTGCCTT-----
 A C G T A C G T A C G T G A T C G A C T C G T A T A C G T A G C G T A C C T A G A T C G C A G T A T G C T A C G G A C T C G T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTAGCCGGTCGTA
-CAGCC-------
 G A T C G A C T C G T A T A C G T A G C G T A C C T A G A T C G C A G T A T G C T A C G G A C T C G T A
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTAGCCGGTCGTA
-SDGCAGGTGCNS
 G A T C G A C T C G T A T A C G T A G C G T A C C T A G A T C G C A G T A T G C T A C G G A C T C G T A
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CTAGCCGGTCGTA
ACTAGCCAATCA--
 A C G T G A T C G A C T C G T A T A C G T A G C G T A C C T A G A T C G C A G T A T G C T A C G G A C T C G T A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

ELF3/MA0640.1/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTAGCCGGTCGTA-
-AACCCGGAAGTAA
 G A T C G A C T C G T A T A C G T A G C G T A C C T A G A T C G C A G T A T G C T A C G G A C T C G T A A C G T
A C G T G C T A G C T A T A G C T A G C T G A C C T A G A C T G T C G A G C T A C T A G G A C T C T G A C T G A

SMAD3/MA0795.1/Jaspar

Match Rank:6
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CTAGCCGGTCGTA
TGTCTAGACG------
 A C G T A C G T A C G T G A T C G A C T C G T A T A C G T A G C G T A C C T A G A T C G C A G T A T G C T A C G G A C T C G T A
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CTAGCCGGTCGTA
--AACAGGTGT--
 G A T C G A C T C G T A T A C G T A G C G T A C C T A G A T C G C A G T A T G C T A C G G A C T C G T A
A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CTAGCCGGTCGTA
--ACCCGGATGTA
 G A T C G A C T C G T A T A C G T A G C G T A C C T A G A T C G C A G T A T G C T A C G G A C T C G T A
A C G T A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

HOXC12/MA0906.1/Jaspar

Match Rank:9
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CTAGCCGGTCGTA----
------GGTCGTAAAAA
 G A T C G A C T C G T A T A C G T A G C G T A C C T A G A T C G C A G T A T G C T A C G G A C T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

EHF/MA0598.2/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CTAGCCGGTCGTA
-AACCCGGAAGTA
 G A T C G A C T C G T A T A C G T A G C G T A C C T A G A T C G C A G T A T G C T A C G G A C T C G T A
A C G T G C T A G C T A T A G C T A G C T G A C T C A G A C T G G T C A T G C A T C A G G A C T C T G A