Information for 24-CTTCAAACACCTTTAC (Motif 36)

A G T C A C G T A G C T A G T C C G T A C G T A C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G C G A T C G T A G T C A G T C A C T A G A C T G A C G T A C T G C G A T A C G T C G A T A C T G C T G A C G T A A C T G
p-value:1e-8
log p-value:-1.972e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 35.7bp
Average Position of motif in Background54.5 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTTCAAACACCTTTAC
CGGTTTCAAA---------
 A C G T A C G T A C G T A G T C A C G T A G C T A G T C C G T A C G T A C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T C G T A A G T C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:2
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTTCAAACACCTTTAC
----TCACACCT----
 A G T C A C G T A G C T A G T C C G T A C G T A C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CTTCAAACACCTTTAC
-----ACCACCTGTT-
 A G T C A C G T A G C T A G T C C G T A C G T A C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CTTCAAACACCTTTAC
GAAGATCAATCACTTA---
 A C G T A C G T A C G T A G T C A C G T A G C T A G T C C G T A C G T A C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T C G T A A G T C
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CTTCAAACACCTTTAC
----TGACACCT----
 A G T C A C G T A G C T A G T C C G T A C G T A C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTTCAAACACCTTTAC
NATTCAAAT--------
 A C G T A G T C A C G T A G C T A G T C C G T A C G T A C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T C G T A A G T C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CTTCAAACACCTTTAC
----TCACACCT----
 A G T C A C G T A G C T A G T C C G T A C G T A C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CTTCAAACACCTTTAC
GAAGATCAATCACTAA---
 A C G T A C G T A C G T A G T C A C G T A G C T A G T C C G T A C G T A C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T C G T A A G T C
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTTCAAACACCTTTAC
--TTTCACACCTN---
 A G T C A C G T A G C T A G T C C G T A C G T A C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T C G T A A G T C
A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T A C G T

SA0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CTTCAAACACCTTTAC---
CCTTTACCCTTCTTCACCTT
 A C G T A G T C A C G T A G C T A G T C C G T A C G T A C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A G T C A G T C G A C T G C A T G C A T G C T A G A T C G A T C A G C T G A C T G C A T G A T C A G C T A G C T G A T C C G T A A G T C G A T C A G C T C G A T