Information for 15-GCCCTGTCCGTGGTGC (Motif 24)

A C T G G T A C A T G C A G T C A G C T C T A G A C G T A G T C A G T C C A T G A C G T A C T G A C T G A C G T A T C G A G T C
Reverse Opposite:
C T A G A T G C C G T A A G T C A G T C C G T A G A T C A C T G A C T G C G T A A G T C C T G A A C T G A T C G C A T G A G T C
p-value:1e-9
log p-value:-2.201e+01
Information Content per bp:1.911
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 24.5bp
Average Position of motif in Background54.6 +/- 2.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGTCCGTGGTGC----
GGCGCTGTCCATGGTGCTGAA
 A C G T A C T G G T A C A T G C A G T C A G C T C T A G A C G T A G T C A G T C C A T G A C G T A C T G A C T G A C G T A T C G A G T C A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GCCCTGTCCGTGGTGC---
GGAGCTGTCCATGGTGCTGA
 A C G T A C T G G T A C A T G C A G T C A G C T C T A G A C G T A G T C A G T C C A T G A C G T A C T G A C T G A C G T A T C G A G T C A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCCCTGTCCGTGGTGC
---CTGTTCCTGG---
 A C T G G T A C A T G C A G T C A G C T C T A G A C G T A G T C A G T C C A T G A C G T A C T G A C T G A C G T A T C G A G T C
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCCCTGTCCGTGGTGC
--BNTGDCCTTG----
 A C T G G T A C A T G C A G T C A G C T C T A G A C G T A G T C A G T C C A T G A C G T A C T G A C T G A C G T A T C G A G T C
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCCCTGTCCGTGGTGC
---CTGACCTTTG---
 A C T G G T A C A T G C A G T C A G C T C T A G A C G T A G T C A G T C C A T G A C G T A C T G A C T G A C G T A T C G A G T C
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GCCCTGTCCGTGGTGC
----CGTGGGTGGTCC
 A C T G G T A C A T G C A G T C A G C T C T A G A C G T A G T C A G T C C A T G A C G T A C T G A C T G A C G T A T C G A G T C
A C G T A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

ZBTB7C/MA0695.1/Jaspar

Match Rank:7
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GCCCTGTCCGTGGTGC-
-----NTCGGTGGTCGC
 A C T G G T A C A T G C A G T C A G C T C T A G A C G T A G T C A G T C C A T G A C G T A C T G A C T G A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GCCCTGTCCGTGGTGC
----TGACCTTGAV--
 A C T G G T A C A T G C A G T C A G C T C T A G A C G T A G T C A G T C C A T G A C G T A C T G A C T G A C G T A T C G A G T C
A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GCCCTGTCCGTGGTGC
--GCTGTG--------
 A C T G G T A C A T G C A G T C A G C T C T A G A C G T A G T C A G T C C A T G A C G T A C T G A C T G A C G T A T C G A G T C
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GCCCTGTCCGTGGTGC
----TGACCTTGAN--
 A C T G G T A C A T G C A G T C A G C T C T A G A C G T A G T C A G T C C A T G A C G T A C T G A C T G A C G T A T C G A G T C
A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T