Information for 10-GACAAATGSCACA (Motif 23)

A C T G C T G A G T A C G T C A C T G A C G T A C G A T A C T G A T G C A G T C T G C A G T A C C G T A
Reverse Opposite:
A C G T A C T G A C G T T C A G A T C G A G T C G C T A A C G T A G C T A C G T A C T G G A C T A G T C
p-value:1e-9
log p-value:-2.203e+01
Information Content per bp:1.742
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif86.7
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets46.8 +/- 26.3bp
Average Position of motif in Background50.0 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GACAAATGSCACA
TAGGGCAAAGGTCA--
 A C G T A C G T A C G T A C T G C T G A G T A C G T C A C T G A C G T A C G A T A C T G A T G C A G T C T G C A G T A C C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GACAAATGSCACA
TGGGGCAAAGGTCA--
 A C G T A C G T A C G T A C T G C T G A G T A C G T C A C T G A C G T A C G A T A C T G A T G C A G T C T G C A G T A C C G T A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GACAAATGSCACA
GTAGGGCAAAGGTCA--
 A C G T A C G T A C G T A C G T A C T G C T G A G T A C G T C A C T G A C G T A C G A T A C T G A T G C A G T C T G C A G T A C C G T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GACAAATGSCACA
AAAACAAAGG-----
 A C G T A C G T A C T G C T G A G T A C G T C A C T G A C G T A C G A T A C T G A T G C A G T C T G C A G T A C C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GACAAATGSCACA
RACAAWGG-----
 A C T G C T G A G T A C G T C A C T G A C G T A C G A T A C T G A T G C A G T C T G C A G T A C C G T A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GACAAATGSCACA
GACATATGTT---
 A C T G C T G A G T A C G T C A C T G A C G T A C G A T A C T G A T G C A G T C T G C A G T A C C G T A
C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GACAAATGSCACA
AACAGATGGC---
 A C T G C T G A G T A C G T C A C T G A C G T A C G A T A C T G A T G C A G T C T G C A G T A C C G T A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GACAAATGSCACA
AACAGATGGT---
 A C T G C T G A G T A C G T C A C T G A C G T A C G A T A C T G A T G C A G T C T G C A G T A C C G T A
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GACAAATGSCACA
ATTTACGACAAATAGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A G T A C G T C A C T G A C G T A C G A T A C T G A T G C A G T C T G C A G T A C C G T A
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GACAAATGSCACA
AACAAAGG-----
 A C T G C T G A G T A C G T C A C T G A C G T A C G A T A C T G A T G C A G T C T G C A G T A C C G T A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T