Information for 7-GAGACCACAG (Motif 19)

A C T G G T C A T C A G C G T A T A G C A G T C C T G A T G A C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G G A C T A C T G A T C G A C G T A G T C C A G T T G A C
p-value:1e-10
log p-value:-2.388e+01
Information Content per bp:1.836
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif4.10%
Number of Background Sequences with motif482.7
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets44.3 +/- 22.4bp
Average Position of motif in Background49.1 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GAGACCACAG
NAAACCACAG
 A C T G G T C A T C A G C G T A T A G C A G T C C T G A T G A C C G T A C T A G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:GAGACCACAG-
-AAACCACAGC
 A C T G G T C A T C A G C G T A T A G C A G T C C T G A T G A C C G T A C T A G A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:GAGACCACAG--
-AAACCACAGAN
 A C T G G T C A T C A G C G T A T A G C A G T C C T G A T G A C C G T A C T A G A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GAGACCACAG--
NWAACCACADNN
 A C T G G T C A T C A G C G T A T A G C A G T C C T G A T G A C C G T A C T A G A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.79
Offset:1
Orientation:forward strand
Alignment:GAGACCACAG-
-AAACCACANN
 A C T G G T C A T C A G C G T A T A G C A G T C C T G A T G A C C G T A C T A G A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

GLI2/MA0734.1/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GAGACCACAG--
GCGACCACACTG
 A C T G G T C A T C A G C G T A T A G C A G T C C T G A T G A C C G T A C T A G A C G T A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

ZBTB7A/MA0750.1/Jaspar

Match Rank:7
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GAGACCACAG-
GGCGACCACCGA
 A C G T A C T G G T C A T C A G C G T A T A G C A G T C C T G A T G A C C G T A C T A G A C G T
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GAGACCACAG-
-AAACCGCAAA
 A C T G G T C A T C A G C G T A T A G C A G T C C T G A T G A C C G T A C T A G A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GAGACCACAG--
GCGACCACCGAA
 A C T G G T C A T C A G C G T A T A G C A G T C C T G A T G A C C G T A C T A G A C G T A C G T
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GAGACCACAG
-AAACCGCAA
 A C T G G T C A T C A G C G T A T A G C A G T C C T G A T G A C C G T A C T A G
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A